Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Cux1P53564 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.74□□□□□ -1.33
Cux1P53564 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Cux1P53564 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cux1P53564 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Cux1P53564 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cux1P53564 Gm25420-201ENSMUST00000104216 127 ntBASIC6.74□□□□□ -1.33
Cux1P53564 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cux1P53564 Gm12638-201ENSMUST00000119531 298 ntBASIC6.74□□□□□ -1.33
Cux1P53564 Gm9003-201ENSMUST00000121810 482 ntBASIC6.74□□□□□ -1.33
Cux1P53564 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC6.74□□□□□ -1.33
Cux1P53564 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC6.74□□□□□ -1.33
Cux1P53564 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC6.74□□□□□ -1.33
Cux1P53564 Scgb2b6-201ENSMUST00000188132 330 ntBASIC6.74□□□□□ -1.33
Cux1P53564 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC6.74□□□□□ -1.33
Cux1P53564 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.74□□□□□ -1.33
Cux1P53564 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC6.74□□□□□ -1.33
Cux1P53564 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Cux1P53564 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC6.74□□□□□ -1.33
Cux1P53564 Gm42717-201ENSMUST00000197309 3463 ntBASIC6.74□□□□□ -1.33
Cux1P53564 Gm37397-201ENSMUST00000194579 2842 ntBASIC6.74□□□□□ -1.33
Cux1P53564 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cux1P53564 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Cux1P53564 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Cux1P53564 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Cux1P53564 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cux1P53564 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cux1P53564 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cux1P53564 Gm23746-201ENSMUST00000104229 125 ntBASIC6.73□□□□□ -1.33
Cux1P53564 Gm7834-201ENSMUST00000117560 437 ntBASIC6.73□□□□□ -1.33
Cux1P53564 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC6.73□□□□□ -1.33
Cux1P53564 Gm15057-201ENSMUST00000121516 534 ntBASIC6.73□□□□□ -1.33
Cux1P53564 Gm10059-201ENSMUST00000131139 171 ntBASIC6.73□□□□□ -1.33
Cux1P53564 Gm23496-201ENSMUST00000157741 248 ntBASIC6.73□□□□□ -1.33
Cux1P53564 Gm24503-201ENSMUST00000158454 135 ntBASIC6.73□□□□□ -1.33
Cux1P53564 Gm27773-201ENSMUST00000184087 78 ntBASIC6.73□□□□□ -1.33
Cux1P53564 Gm27899-201ENSMUST00000184715 64 ntBASIC6.73□□□□□ -1.33
Cux1P53564 Gm18547-201ENSMUST00000192439 811 ntBASIC6.73□□□□□ -1.33
Cux1P53564 Gm5995-201ENSMUST00000204107 1273 ntBASIC6.73□□□□□ -1.33
Cux1P53564 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cux1P53564 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Cux1P53564 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Cux1P53564 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Cux1P53564 Gm42946-201ENSMUST00000196108 2570 ntBASIC6.73□□□□□ -1.33
Cux1P53564 Gm37936-201ENSMUST00000194647 1322 ntBASIC6.73□□□□□ -1.33
Cux1P53564 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Cux1P53564 Mir690-201ENSMUST00000102110 109 ntBASIC6.72□□□□□ -1.33
Cux1P53564 Gm11931-201ENSMUST00000121630 447 ntBASIC6.72□□□□□ -1.33
Cux1P53564 Gm3339-201ENSMUST00000163462 475 ntBASIC6.72□□□□□ -1.33
Cux1P53564 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cux1P53564 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cux1P53564 Gm44946-201ENSMUST00000208425 572 ntBASIC6.72□□□□□ -1.33
Cux1P53564 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC6.72□□□□□ -1.33
Cux1P53564 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Cux1P53564 Gm37726-201ENSMUST00000193246 3886 ntBASIC6.72□□□□□ -1.33
Cux1P53564 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cux1P53564 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Cux1P53564 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cux1P53564 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cux1P53564 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cux1P53564 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cux1P53564 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cux1P53564 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cux1P53564 Gm37140-201ENSMUST00000192914 1684 ntBASIC6.71□□□□□ -1.33
Cux1P53564 Gm23133-201ENSMUST00000104255 135 ntBASIC6.71□□□□□ -1.33
Cux1P53564 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Cux1P53564 Gm12067-201ENSMUST00000119755 1148 ntBASIC6.71□□□□□ -1.33
Cux1P53564 Gm22816-201ENSMUST00000157450 117 ntBASIC6.71□□□□□ -1.33
Cux1P53564 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC6.71□□□□□ -1.33
Cux1P53564 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Cux1P53564 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC6.71□□□□□ -1.33
Cux1P53564 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC6.71□□□□□ -1.33
Cux1P53564 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Cux1P53564 AC140344.1-201ENSMUST00000223384 387 ntBASIC6.71□□□□□ -1.33
Cux1P53564 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC6.71□□□□□ -1.33
Cux1P53564 AC162183.1-202ENSMUST00000225434 904 ntBASIC6.71□□□□□ -1.33
Cux1P53564 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC6.71□□□□□ -1.33
Cux1P53564 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
Cux1P53564 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Cux1P53564 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC6.71□□□□□ -1.33
Cux1P53564 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
Cux1P53564 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cux1P53564 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Cux1P53564 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cux1P53564 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Cux1P53564 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Cux1P53564 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cux1P53564 Gm5155-201ENSMUST00000072381 2841 ntBASIC6.71□□□□□ -1.34
Cux1P53564 Gm26418-201ENSMUST00000104275 137 ntBASIC6.71□□□□□ -1.34
Cux1P53564 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Cux1P53564 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
Cux1P53564 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Cux1P53564 Mir6996-201ENSMUST00000183922 61 ntBASIC6.71□□□□□ -1.34
Cux1P53564 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC6.71□□□□□ -1.34
Cux1P53564 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC6.71□□□□□ -1.34
Cux1P53564 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Cux1P53564 AC122188.1-201ENSMUST00000217534 312 ntBASIC6.71□□□□□ -1.34
Cux1P53564 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Cux1P53564 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Cux1P53564 Olfr1143-201ENSMUST00000090708 945 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms