Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Mir3062-201ENSMUST00000174986 105 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm23162-201ENSMUST00000175081 121 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm26318-201ENSMUST00000176507 96 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Shmt1P50431 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Shmt1P50431 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Shmt1P50431 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Shmt1P50431 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Shmt1P50431 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC5.62□□□□□ -1.51
Shmt1P50431 Gm21803-201ENSMUST00000188897 693 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Shmt1P50431 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Shmt1P50431 Gm28567-201ENSMUST00000190270 693 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.62□□□□□ -1.51
Shmt1P50431 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC5.62□□□□□ -1.51
Shmt1P50431 Gm37044-201ENSMUST00000193531 693 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm38369-201ENSMUST00000195101 693 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm18150-201ENSMUST00000195341 645 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Shmt1P50431 Gm2622-201ENSMUST00000200018 471 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm43228-201ENSMUST00000200735 264 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Shmt1P50431 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm18691-201ENSMUST00000203593 872 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm9375-201ENSMUST00000208899 903 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm18414-201ENSMUST00000210858 694 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm21041-201ENSMUST00000214829 823 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 AC091260.1-201ENSMUST00000216112 229 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm18510-201ENSMUST00000219335 1096 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Zfp429-203ENSMUST00000224684 524 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Shmt1P50431 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Shmt1P50431 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Shmt1P50431 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Shmt1P50431 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Shmt1P50431 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Shmt1P50431 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Shmt1P50431 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Shmt1P50431 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Shmt1P50431 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Shmt1P50431 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
Shmt1P50431 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
Shmt1P50431 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Shmt1P50431 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Shmt1P50431 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Shmt1P50431 Gm23692-201ENSMUST00000101881 160 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Shmt1P50431 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Shmt1P50431 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Shmt1P50431 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Gm15021-201ENSMUST00000117832 742 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Shmt1P50431 Gm12734-201ENSMUST00000120228 948 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Gm12044-201ENSMUST00000120335 213 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.61□□□□□ -1.51
Shmt1P50431 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.61□□□□□ -1.51
Shmt1P50431 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Shmt1P50431 Gm24186-201ENSMUST00000157983 127 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Gm25348-201ENSMUST00000158961 111 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Gm2855-201ENSMUST00000166765 456 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.61□□□□□ -1.51
Shmt1P50431 Gm10784-201ENSMUST00000178715 238 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.61□□□□□ -1.51
Shmt1P50431 Gm28353-201ENSMUST00000186482 570 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Gm28533-201ENSMUST00000186741 570 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.61□□□□□ -1.51
Shmt1P50431 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5.61□□□□□ -1.51
Shmt1P50431 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
Shmt1P50431 Gm7897-201ENSMUST00000193981 554 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Gm38146-201ENSMUST00000194121 1293 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.61□□□□□ -1.51
Shmt1P50431 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.61□□□□□ -1.51
Shmt1P50431 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC5.61□□□□□ -1.51
Shmt1P50431 Gm43810-201ENSMUST00000201018 232 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Gm44952-201ENSMUST00000204443 433 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Gm6261-201ENSMUST00000204707 760 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Shmt1P50431 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Gm45660-201ENSMUST00000210267 151 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 Gm8734-201ENSMUST00000211669 1312 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.61□□□□□ -1.51
Shmt1P50431 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 CT009733.1-201ENSMUST00000225322 425 ntBASIC5.61□□□□□ -1.51
Shmt1P50431 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Shmt1P50431 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
Shmt1P50431 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Shmt1P50431 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Shmt1P50431 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Shmt1P50431 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Shmt1P50431 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Shmt1P50431 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Shmt1P50431 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms