Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Brca1P48754 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Brca1P48754 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC5.04□□□□□ -1.6
Brca1P48754 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Brca1P48754 AC123534.1-201ENSMUST00000224060 656 ntBASIC5.04□□□□□ -1.6
Brca1P48754 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Brca1P48754 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
Brca1P48754 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Brca1P48754 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Brca1P48754 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.04□□□□□ -1.6
Brca1P48754 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Brca1P48754 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Brca1P48754 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.04□□□□□ -1.6
Brca1P48754 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Brca1P48754 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Brca1P48754 Gm14369-201ENSMUST00000121355 285 ntBASIC5.04□□□□□ -1.6
Brca1P48754 Gm15885-201ENSMUST00000122114 388 ntBASIC5.04□□□□□ -1.6
Brca1P48754 Gm23082-201ENSMUST00000157852 133 ntBASIC5.04□□□□□ -1.6
Brca1P48754 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
Brca1P48754 Gm29428-201ENSMUST00000190086 409 ntBASIC5.04□□□□□ -1.6
Brca1P48754 AC100733.1-201ENSMUST00000228494 407 ntBASIC5.04□□□□□ -1.6
Brca1P48754 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Brca1P48754 Gm43527-201ENSMUST00000198749 3178 ntBASIC5.04□□□□□ -1.6
Brca1P48754 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.04□□□□□ -1.6
Brca1P48754 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Brca1P48754 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Brca1P48754 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Brca1P48754 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
Brca1P48754 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Brca1P48754 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Brca1P48754 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC5.03□□□□□ -1.6
Brca1P48754 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Brca1P48754 Gm11781-201ENSMUST00000118328 472 ntBASIC5.03□□□□□ -1.6
Brca1P48754 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Brca1P48754 Gm24636-201ENSMUST00000158673 288 ntBASIC5.03□□□□□ -1.6
Brca1P48754 Mir6345-201ENSMUST00000184286 128 ntBASIC5.03□□□□□ -1.6
Brca1P48754 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Brca1P48754 Gm18303-201ENSMUST00000190055 1176 ntBASIC5.03□□□□□ -1.6
Brca1P48754 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Brca1P48754 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Brca1P48754 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC5.03□□□□□ -1.6
Brca1P48754 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Brca1P48754 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Brca1P48754 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Brca1P48754 Gm45804-201ENSMUST00000212137 3435 ntBASIC5.03□□□□□ -1.6
Brca1P48754 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Brca1P48754 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Brca1P48754 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
Brca1P48754 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Brca1P48754 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.03□□□□□ -1.6
Brca1P48754 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Brca1P48754 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC5.03□□□□□ -1.6
Brca1P48754 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Brca1P48754 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Brca1P48754 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Brca1P48754 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Brca1P48754 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Brca1P48754 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC5.02□□□□□ -1.61
Brca1P48754 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Brca1P48754 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Brca1P48754 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Brca1P48754 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC5.02□□□□□ -1.61
Brca1P48754 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC5.02□□□□□ -1.61
Brca1P48754 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Brca1P48754 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Brca1P48754 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Brca1P48754 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Brca1P48754 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Brca1P48754 Mir292-201ENSMUST00000104847 82 ntBASIC5.02□□□□□ -1.61
Brca1P48754 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Brca1P48754 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Brca1P48754 Gm23098-201ENSMUST00000157552 299 ntBASIC5.02□□□□□ -1.61
Brca1P48754 Gm22120-201ENSMUST00000175590 70 ntBASIC5.02□□□□□ -1.61
Brca1P48754 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC5.02□□□□□ -1.61
Brca1P48754 Gm6261-201ENSMUST00000204707 760 ntBASIC5.02□□□□□ -1.61
Brca1P48754 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC5.02□□□□□ -1.61
Brca1P48754 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.02□□□□□ -1.61
Brca1P48754 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.02□□□□□ -1.61
Brca1P48754 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Brca1P48754 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Brca1P48754 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Brca1P48754 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Brca1P48754 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Brca1P48754 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Brca1P48754 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Brca1P48754 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Brca1P48754 Gm37478-201ENSMUST00000193624 3495 ntBASIC5.02□□□□□ -1.61
Brca1P48754 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Brca1P48754 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Brca1P48754 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.02□□□□□ -1.61
Brca1P48754 Gm18359-201ENSMUST00000173024 1459 ntBASIC5.02□□□□□ -1.61
Brca1P48754 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.02□□□□□ -1.61
Brca1P48754 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Brca1P48754 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Brca1P48754 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.02□□□□□ -1.61
Brca1P48754 Gm13787-201ENSMUST00000120422 168 ntBASIC5.02□□□□□ -1.61
Brca1P48754 Gm23959-201ENSMUST00000157208 324 ntBASIC5.02□□□□□ -1.61
Brca1P48754 Gm26347-201ENSMUST00000157526 131 ntBASIC5.02□□□□□ -1.61
Brca1P48754 Gm23860-201ENSMUST00000179446 132 ntBASIC5.02□□□□□ -1.61
Brca1P48754 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 131.2 ms