Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm16259-201ENSMUST00000145241 553 ntBASIC4.33□□□□□ -1.72
Sox6P40645 Gm23171-201ENSMUST00000157159 264 ntBASIC4.33□□□□□ -1.72
Sox6P40645 Gm23046-201ENSMUST00000158369 284 ntBASIC4.33□□□□□ -1.72
Sox6P40645 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.33□□□□□ -1.72
Sox6P40645 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC4.33□□□□□ -1.72
Sox6P40645 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Sox6P40645 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC4.33□□□□□ -1.72
Sox6P40645 Mir6903-201ENSMUST00000183597 88 ntBASIC4.33□□□□□ -1.72
Sox6P40645 Mir7006-201ENSMUST00000183624 69 ntBASIC4.33□□□□□ -1.72
Sox6P40645 Mir6374-201ENSMUST00000184003 107 ntBASIC4.33□□□□□ -1.72
Sox6P40645 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC4.33□□□□□ -1.72
Sox6P40645 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.33□□□□□ -1.72
Sox6P40645 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.33□□□□□ -1.72
Sox6P40645 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.33□□□□□ -1.72
Sox6P40645 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.33□□□□□ -1.72
Sox6P40645 Gm18850-201ENSMUST00000211578 388 ntBASIC4.33□□□□□ -1.72
Sox6P40645 AC153961.2-201ENSMUST00000218877 164 ntBASIC4.33□□□□□ -1.72
Sox6P40645 Gm19189-201ENSMUST00000221689 754 ntBASIC4.33□□□□□ -1.72
Sox6P40645 AC158536.1-201ENSMUST00000222510 256 ntBASIC4.33□□□□□ -1.72
Sox6P40645 CT025523.1-201ENSMUST00000228318 694 ntBASIC4.33□□□□□ -1.72
Sox6P40645 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Sox6P40645 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Sox6P40645 Gm7676-201ENSMUST00000084055 319 ntBASIC4.33□□□□□ -1.72
Sox6P40645 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Sox6P40645 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Sox6P40645 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Sox6P40645 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Sox6P40645 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Sox6P40645 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Sox6P40645 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Sox6P40645 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Sox6P40645 Gm25096-201ENSMUST00000104043 129 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Sox6P40645 Gm15297-201ENSMUST00000117795 290 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Gm16106-201ENSMUST00000119187 294 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Gm13430-201ENSMUST00000121366 288 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Gm12685-201ENSMUST00000121702 214 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Gm25103-201ENSMUST00000122671 318 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.32□□□□□ -1.72
Sox6P40645 Gm22870-201ENSMUST00000157501 112 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Gm23496-201ENSMUST00000157741 248 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Gm26352-201ENSMUST00000158223 125 ntBASIC4.32□□□□□ -1.72
Sox6P40645 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC4.32□□□□□ -1.72
Sox6P40645 Gm8214-201ENSMUST00000172123 351 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Gm25037-201ENSMUST00000175418 110 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Gm22355-201ENSMUST00000175531 96 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Gm21756-201ENSMUST00000178380 930 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Gm21405-201ENSMUST00000179024 930 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Gm21191-201ENSMUST00000186484 930 ntBASIC4.32□□□□□ -1.72
Sox6P40645 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC4.32□□□□□ -1.72
Sox6P40645 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Sox6P40645 Gm29503-201ENSMUST00000191044 930 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Gm8891-201ENSMUST00000198546 832 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Gm44402-201ENSMUST00000203677 238 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Sox6P40645 Gm8556-201ENSMUST00000210437 664 ntBASIC4.32□□□□□ -1.72
Sox6P40645 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC4.32□□□□□ -1.72
Sox6P40645 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.32□□□□□ -1.72
Sox6P40645 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Sox6P40645 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.32□□□□□ -1.72
Sox6P40645 AV026068-224ENSMUST00000224827 928 ntBASIC4.32□□□□□ -1.72
Sox6P40645 CT030194.2-201ENSMUST00000225752 379 ntBASIC4.32□□□□□ -1.72
Sox6P40645 AC154724.1-201ENSMUST00000225782 821 ntBASIC4.32□□□□□ -1.72
Sox6P40645 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.32□□□□□ -1.72
Sox6P40645 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.32□□□□□ -1.72
Sox6P40645 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.32□□□□□ -1.72
Sox6P40645 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Sox6P40645 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Sox6P40645 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Sox6P40645 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
Sox6P40645 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Sox6P40645 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.32□□□□□ -1.72
Sox6P40645 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Sox6P40645 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Sox6P40645 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Sox6P40645 Gm43843-201ENSMUST00000202396 1587 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Sox6P40645 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sox6P40645 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sox6P40645 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Sox6P40645 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Sox6P40645 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Sox6P40645 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Sox6P40645 Gm13867-201ENSMUST00000120844 395 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Sox6P40645 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Sox6P40645 Gm2182-201ENSMUST00000145243 663 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Gm25966-201ENSMUST00000157169 117 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Gm26347-201ENSMUST00000157526 131 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Gm22158-201ENSMUST00000158411 126 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Gm22940-201ENSMUST00000158560 155 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Gm24636-201ENSMUST00000158673 288 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Gm22529-201ENSMUST00000158817 123 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Gm7281-201ENSMUST00000160010 543 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Gm17086-201ENSMUST00000171346 484 ntBASIC4.31□□□□□ -1.72
Sox6P40645 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms