Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm12717-201ENSMUST00000118427 983 ntBASIC5.59□□□□□ -1.51
Traf1P39428 Gm16106-201ENSMUST00000119187 294 ntBASIC5.59□□□□□ -1.51
Traf1P39428 Mup-ps21-201ENSMUST00000119998 448 ntBASIC5.59□□□□□ -1.51
Traf1P39428 Gm12752-201ENSMUST00000121657 811 ntBASIC5.59□□□□□ -1.51
Traf1P39428 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.59□□□□□ -1.51
Traf1P39428 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC5.59□□□□□ -1.51
Traf1P39428 Gm26034-201ENSMUST00000158154 116 ntBASIC5.59□□□□□ -1.51
Traf1P39428 Gm16114-201ENSMUST00000161930 300 ntBASIC5.59□□□□□ -1.51
Traf1P39428 Mir3058-201ENSMUST00000175126 91 ntBASIC5.59□□□□□ -1.51
Traf1P39428 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Traf1P39428 Mir7031-201ENSMUST00000183860 65 ntBASIC5.59□□□□□ -1.51
Traf1P39428 Gm19280-201ENSMUST00000190191 205 ntBASIC5.59□□□□□ -1.51
Traf1P39428 Gm38046-201ENSMUST00000192733 550 ntBASIC5.59□□□□□ -1.51
Traf1P39428 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC5.59□□□□□ -1.51
Traf1P39428 AC122464.1-201ENSMUST00000202789 770 ntBASIC5.59□□□□□ -1.51
Traf1P39428 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC5.59□□□□□ -1.51
Traf1P39428 Gm4714-201ENSMUST00000203395 279 ntBASIC5.59□□□□□ -1.51
Traf1P39428 Gm19096-201ENSMUST00000209705 766 ntBASIC5.59□□□□□ -1.51
Traf1P39428 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC5.59□□□□□ -1.51
Traf1P39428 AC109180.1-201ENSMUST00000218676 398 ntBASIC5.59□□□□□ -1.51
Traf1P39428 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC5.59□□□□□ -1.51
Traf1P39428 Gm40598-201ENSMUST00000222953 547 ntBASIC5.59□□□□□ -1.51
Traf1P39428 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Traf1P39428 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Traf1P39428 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Traf1P39428 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
Traf1P39428 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Traf1P39428 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Traf1P39428 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.59□□□□□ -1.52
Traf1P39428 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.58□□□□□ -1.52
Traf1P39428 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Traf1P39428 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Traf1P39428 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Traf1P39428 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Traf1P39428 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Traf1P39428 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Traf1P39428 Gm7312-201ENSMUST00000118798 469 ntBASIC5.58□□□□□ -1.52
Traf1P39428 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC5.58□□□□□ -1.52
Traf1P39428 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Traf1P39428 Gm26490-201ENSMUST00000157879 140 ntBASIC5.58□□□□□ -1.52
Traf1P39428 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Traf1P39428 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Traf1P39428 Mir6963-201ENSMUST00000183535 71 ntBASIC5.58□□□□□ -1.52
Traf1P39428 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Traf1P39428 Gm37632-201ENSMUST00000191811 1142 ntBASIC5.58□□□□□ -1.52
Traf1P39428 Gm43144-201ENSMUST00000198256 485 ntBASIC5.58□□□□□ -1.52
Traf1P39428 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC5.58□□□□□ -1.52
Traf1P39428 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.58□□□□□ -1.52
Traf1P39428 AC107369.1-201ENSMUST00000227373 860 ntBASIC5.58□□□□□ -1.52
Traf1P39428 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Traf1P39428 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Traf1P39428 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Traf1P39428 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Traf1P39428 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Traf1P39428 Gm45235-201ENSMUST00000208016 4465 ntBASIC5.58□□□□□ -1.52
Traf1P39428 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Traf1P39428 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Traf1P39428 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Traf1P39428 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC5.58□□□□□ -1.52
Traf1P39428 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Traf1P39428 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Traf1P39428 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Traf1P39428 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Traf1P39428 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Traf1P39428 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.57□□□□□ -1.52
Traf1P39428 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Traf1P39428 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Traf1P39428 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Traf1P39428 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Traf1P39428 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Traf1P39428 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Traf1P39428 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.57□□□□□ -1.52
Traf1P39428 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Traf1P39428 Mir879-201ENSMUST00000104703 76 ntBASIC5.57□□□□□ -1.52
Traf1P39428 Gm12186-201ENSMUST00000119050 945 ntBASIC5.57□□□□□ -1.52
Traf1P39428 Gm12820-201ENSMUST00000119233 342 ntBASIC5.57□□□□□ -1.52
Traf1P39428 Gm12704-201ENSMUST00000119789 464 ntBASIC5.57□□□□□ -1.52
Traf1P39428 Gm12041-201ENSMUST00000121606 602 ntBASIC5.57□□□□□ -1.52
Traf1P39428 Gm22819-201ENSMUST00000157445 303 ntBASIC5.57□□□□□ -1.52
Traf1P39428 Gm24113-201ENSMUST00000157477 276 ntBASIC5.57□□□□□ -1.52
Traf1P39428 Gm22940-201ENSMUST00000158560 155 ntBASIC5.57□□□□□ -1.52
Traf1P39428 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Traf1P39428 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Traf1P39428 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Traf1P39428 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Traf1P39428 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.57□□□□□ -1.52
Traf1P39428 Gm26828-201ENSMUST00000180640 172 ntBASIC5.57□□□□□ -1.52
Traf1P39428 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Traf1P39428 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
Traf1P39428 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.57□□□□□ -1.52
Traf1P39428 Mir142-201ENSMUST00000198092 64 ntBASIC5.57□□□□□ -1.52
Traf1P39428 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.57□□□□□ -1.52
Traf1P39428 Gm44952-201ENSMUST00000204443 433 ntBASIC5.57□□□□□ -1.52
Traf1P39428 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.57□□□□□ -1.52
Traf1P39428 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.57□□□□□ -1.52
Traf1P39428 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.57□□□□□ -1.52
Traf1P39428 AC102542.1-201ENSMUST00000225204 1138 ntBASIC5.57□□□□□ -1.52
Traf1P39428 AC154730.1-201ENSMUST00000227874 816 ntBASIC5.57□□□□□ -1.52
Traf1P39428 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Traf1P39428 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms