Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Mir193b-201ENSMUST00000103784 79 ntBASIC4.91□□□□□ -1.62
Lire1P11260 Gm15001-201ENSMUST00000117657 795 ntBASIC4.91□□□□□ -1.62
Lire1P11260 Gm16089-201ENSMUST00000117679 336 ntBASIC4.91□□□□□ -1.62
Lire1P11260 Gm14907-201ENSMUST00000121948 854 ntBASIC4.91□□□□□ -1.62
Lire1P11260 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lire1P11260 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC4.91□□□□□ -1.62
Lire1P11260 Gm7855-201ENSMUST00000137737 687 ntBASIC4.91□□□□□ -1.62
Lire1P11260 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lire1P11260 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.91□□□□□ -1.62
Lire1P11260 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC4.91□□□□□ -1.62
Lire1P11260 Gm8358-201ENSMUST00000167222 555 ntBASIC4.91□□□□□ -1.62
Lire1P11260 Gm3170-201ENSMUST00000168753 850 ntBASIC4.91□□□□□ -1.62
Lire1P11260 Gm9613-201ENSMUST00000171662 196 ntBASIC4.91□□□□□ -1.62
Lire1P11260 Mir5098-201ENSMUST00000175320 82 ntBASIC4.91□□□□□ -1.62
Lire1P11260 Gm3348-201ENSMUST00000177813 850 ntBASIC4.91□□□□□ -1.62
Lire1P11260 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Lire1P11260 Gm6717-201ENSMUST00000185549 838 ntBASIC4.91□□□□□ -1.62
Lire1P11260 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC4.91□□□□□ -1.62
Lire1P11260 Gm29534-201ENSMUST00000187328 382 ntBASIC4.91□□□□□ -1.62
Lire1P11260 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.91□□□□□ -1.62
Lire1P11260 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.91□□□□□ -1.62
Lire1P11260 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lire1P11260 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC4.91□□□□□ -1.62
Lire1P11260 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.91□□□□□ -1.62
Lire1P11260 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lire1P11260 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lire1P11260 Gm44865-201ENSMUST00000207240 531 ntBASIC4.91□□□□□ -1.62
Lire1P11260 CU024910.1-201ENSMUST00000214310 418 ntBASIC4.91□□□□□ -1.62
Lire1P11260 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC4.91□□□□□ -1.62
Lire1P11260 AC153961.2-201ENSMUST00000218877 164 ntBASIC4.91□□□□□ -1.62
Lire1P11260 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC4.91□□□□□ -1.62
Lire1P11260 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Lire1P11260 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Lire1P11260 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Lire1P11260 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lire1P11260 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Lire1P11260 Gm25739-201ENSMUST00000082886 107 ntBASIC4.91□□□□□ -1.62
Lire1P11260 Gm23459-201ENSMUST00000083259 131 ntBASIC4.91□□□□□ -1.62
Lire1P11260 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lire1P11260 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lire1P11260 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lire1P11260 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lire1P11260 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Lire1P11260 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lire1P11260 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lire1P11260 Gm43567-201ENSMUST00000197581 1978 ntBASIC4.91□□□□□ -1.62
Lire1P11260 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
Lire1P11260 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.91□□□□□ -1.62
Lire1P11260 Gm37303-201ENSMUST00000194202 1559 ntBASIC4.91□□□□□ -1.62
Lire1P11260 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Lire1P11260 Gm37890-201ENSMUST00000195610 3992 ntBASIC4.9□□□□□ -1.62
Lire1P11260 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Lire1P11260 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.62
Lire1P11260 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Lire1P11260 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.9□□□□□ -1.62
Lire1P11260 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.9□□□□□ -1.62
Lire1P11260 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.62
Lire1P11260 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Lire1P11260 Gm25537-201ENSMUST00000103851 109 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Gm11826-201ENSMUST00000118781 438 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Lire1P11260 Gm12001-201ENSMUST00000121727 913 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Gm13868-201ENSMUST00000122411 294 ntBASIC4.9□□□□□ -1.63
Lire1P11260 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Gm16373-201ENSMUST00000129517 303 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.9□□□□□ -1.63
Lire1P11260 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Lire1P11260 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC4.9□□□□□ -1.63
Lire1P11260 Gm4487-201ENSMUST00000150617 442 ntBASIC4.9□□□□□ -1.63
Lire1P11260 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Lire1P11260 Gm10319-202ENSMUST00000159439 846 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Lire1P11260 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Lire1P11260 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Lire1P11260 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Lire1P11260 Gm3851-201ENSMUST00000168653 318 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Lire1P11260 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Lire1P11260 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Lire1P11260 Gm28976-201ENSMUST00000188070 144 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.9□□□□□ -1.63
Lire1P11260 Gm21006-201ENSMUST00000196930 667 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Lire1P11260 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Lire1P11260 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Lire1P11260 Gm7204-201ENSMUST00000062591 600 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Lire1P11260 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Lire1P11260 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Lire1P11260 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Lire1P11260 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Lire1P11260 Gm17791-201ENSMUST00000185660 1501 ntBASIC4.9□□□□□ -1.63
Lire1P11260 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Lire1P11260 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Gm38374-201ENSMUST00000194417 2033 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Gm38368-201ENSMUST00000193181 1335 ntBASIC4.9□□□□□ -1.63
Lire1P11260 Gm45172-201ENSMUST00000206054 1301 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms