Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Hmgb3O54879 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Hmgb3O54879 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Hmgb3O54879 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm17752-201ENSMUST00000185787 3726 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Hmgb3O54879 AC113059.3-201ENSMUST00000217423 2777 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm38065-201ENSMUST00000193147 3492 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 AC126673.1-201ENSMUST00000223208 3856 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb3O54879 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm37900-201ENSMUST00000195510 3805 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgb3O54879 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm25758-201ENSMUST00000103987 129 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm3943-201ENSMUST00000118606 718 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm10059-201ENSMUST00000131139 171 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm24860-201ENSMUST00000158457 276 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm16557-201ENSMUST00000159182 191 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm16102-201ENSMUST00000160955 420 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgb3O54879 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm27254-201ENSMUST00000183926 517 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm28943-201ENSMUST00000186187 615 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm28736-201ENSMUST00000186257 615 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm29401-201ENSMUST00000186690 615 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm29178-204ENSMUST00000186784 615 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm28589-201ENSMUST00000186991 615 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm28936-201ENSMUST00000187153 615 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm29121-201ENSMUST00000187611 615 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm28243-201ENSMUST00000187801 615 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm28844-202ENSMUST00000187977 615 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm29058-201ENSMUST00000189510 615 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm29624-201ENSMUST00000190018 615 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm28780-201ENSMUST00000190223 615 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm28969-211ENSMUST00000190992 615 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm28990-207ENSMUST00000191219 615 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm36468-201ENSMUST00000192119 615 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm31572-201ENSMUST00000193341 615 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm34768-201ENSMUST00000193884 565 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm30175-201ENSMUST00000194173 615 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm30858-201ENSMUST00000195516 615 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm42830-201ENSMUST00000196642 313 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm44817-201ENSMUST00000205416 453 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm44521-201ENSMUST00000206469 217 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC3.6□□□□□ -1.83
Hmgb3O54879 AC126554.4-201ENSMUST00000221055 409 ntBASIC3.6□□□□□ -1.83
Hmgb3O54879 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Hmgb3O54879 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Hmgb3O54879 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgb3O54879 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Hmgb3O54879 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Hmgb3O54879 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgb3O54879 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.6□□□□□ -1.83
Hmgb3O54879 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgb3O54879 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Hmgb3O54879 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgb3O54879 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Hmgb3O54879 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgb3O54879 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Hmgb3O54879 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Hmgb3O54879 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm42551-201ENSMUST00000197701 1573 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Hmgb3O54879 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
Hmgb3O54879 AC129085.3-201ENSMUST00000225686 1705 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Hmgb3O54879 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm42615-201ENSMUST00000197704 1820 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm24608-201ENSMUST00000104381 136 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Mir105-201ENSMUST00000104655 80 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm14304-201ENSMUST00000117272 446 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm14067-201ENSMUST00000119340 314 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm12087-201ENSMUST00000121878 258 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Hmgb3O54879 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC3.59□□□□□ -1.83
Hmgb3O54879 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 138.7 ms