Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.27□□□□□ -1.73
Cx3cl1O35188 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Cx3cl1O35188 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cx3cl1O35188 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Cx3cl1O35188 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cx3cl1O35188 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.27□□□□□ -1.73
Cx3cl1O35188 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.27□□□□□ -1.73
Cx3cl1O35188 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cx3cl1O35188 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Cx3cl1O35188 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.27□□□□□ -1.73
Cx3cl1O35188 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cx3cl1O35188 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Cx3cl1O35188 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cx3cl1O35188 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.26□□□□□ -1.73
Cx3cl1O35188 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cx3cl1O35188 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Gm12062-201ENSMUST00000117533 259 ntBASIC4.26□□□□□ -1.73
Cx3cl1O35188 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.26□□□□□ -1.73
Cx3cl1O35188 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Gm16378-201ENSMUST00000179168 342 ntBASIC4.26□□□□□ -1.73
Cx3cl1O35188 Gm22917-201ENSMUST00000180116 110 ntBASIC4.26□□□□□ -1.73
Cx3cl1O35188 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Gm27690-201ENSMUST00000184596 126 ntBASIC4.26□□□□□ -1.73
Cx3cl1O35188 Gm38221-201ENSMUST00000195146 365 ntBASIC4.26□□□□□ -1.73
Cx3cl1O35188 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.26□□□□□ -1.73
Cx3cl1O35188 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.26□□□□□ -1.73
Cx3cl1O35188 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.26□□□□□ -1.73
Cx3cl1O35188 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC4.26□□□□□ -1.73
Cx3cl1O35188 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.26□□□□□ -1.73
Cx3cl1O35188 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.26□□□□□ -1.73
Cx3cl1O35188 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.26□□□□□ -1.73
Cx3cl1O35188 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.26□□□□□ -1.73
Cx3cl1O35188 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.26□□□□□ -1.73
Cx3cl1O35188 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.26□□□□□ -1.73
Cx3cl1O35188 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cx3cl1O35188 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm11633-201ENSMUST00000118176 444 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm12328-201ENSMUST00000118611 197 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm26354-201ENSMUST00000158221 129 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm25534-201ENSMUST00000175365 125 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm25019-201ENSMUST00000179732 110 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cx3cl1O35188 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm27165-201ENSMUST00000183951 232 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Dlx6os1-204ENSMUST00000184182 146 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Mir6986-201ENSMUST00000184483 58 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm8480-201ENSMUST00000190350 698 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm37632-201ENSMUST00000191811 1142 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm37095-201ENSMUST00000195421 205 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm17956-201ENSMUST00000199931 838 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm6051-201ENSMUST00000201529 352 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm17811-201ENSMUST00000206193 387 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm44757-201ENSMUST00000206373 157 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm45269-201ENSMUST00000210359 282 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Mir504-201ENSMUST00000093602 79 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm43845-201ENSMUST00000202462 1820 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.25□□□□□ -1.73
Cx3cl1O35188 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cx3cl1O35188 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Cx3cl1O35188 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms