Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CtcflA2APF3 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.23□□□□□ -1.73
CtcflA2APF3 Gm43712-201ENSMUST00000198020 291 ntBASIC4.23□□□□□ -1.73
CtcflA2APF3 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.23□□□□□ -1.73
CtcflA2APF3 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CtcflA2APF3 Gm44795-201ENSMUST00000205496 319 ntBASIC4.23□□□□□ -1.73
CtcflA2APF3 Gm17811-201ENSMUST00000206193 387 ntBASIC4.23□□□□□ -1.73
CtcflA2APF3 Gm19366-201ENSMUST00000206996 156 ntBASIC4.23□□□□□ -1.73
CtcflA2APF3 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC4.23□□□□□ -1.73
CtcflA2APF3 Gm45660-201ENSMUST00000210267 151 ntBASIC4.23□□□□□ -1.73
CtcflA2APF3 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC4.23□□□□□ -1.73
CtcflA2APF3 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.23□□□□□ -1.73
CtcflA2APF3 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC4.23□□□□□ -1.73
CtcflA2APF3 AC153840.1-201ENSMUST00000219685 313 ntBASIC4.23□□□□□ -1.73
CtcflA2APF3 AC131117.1-201ENSMUST00000225154 1171 ntBASIC4.23□□□□□ -1.73
CtcflA2APF3 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.23□□□□□ -1.73
CtcflA2APF3 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.23□□□□□ -1.73
CtcflA2APF3 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC4.23□□□□□ -1.73
CtcflA2APF3 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CtcflA2APF3 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
CtcflA2APF3 Gm9386-201ENSMUST00000095195 381 ntBASIC4.23□□□□□ -1.73
CtcflA2APF3 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CtcflA2APF3 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CtcflA2APF3 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CtcflA2APF3 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.23□□□□□ -1.73
CtcflA2APF3 Gm37114-201ENSMUST00000195065 1804 ntBASIC4.23□□□□□ -1.73
CtcflA2APF3 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CtcflA2APF3 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.23□□□□□ -1.73
CtcflA2APF3 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CtcflA2APF3 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CtcflA2APF3 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CtcflA2APF3 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CtcflA2APF3 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CtcflA2APF3 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CtcflA2APF3 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CtcflA2APF3 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm24541-201ENSMUST00000103871 96 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm23274-201ENSMUST00000104056 130 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm15745-201ENSMUST00000119807 115 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm24860-201ENSMUST00000158457 276 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm5258-201ENSMUST00000165437 327 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm17711-201ENSMUST00000172028 237 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CtcflA2APF3 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm28830-201ENSMUST00000188192 213 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.22□□□□□ -1.73
CtcflA2APF3 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm44456-201ENSMUST00000196554 89 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm44776-201ENSMUST00000207212 381 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm44845-201ENSMUST00000208773 335 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC4.22□□□□□ -1.73
CtcflA2APF3 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CtcflA2APF3 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC4.22□□□□□ -1.73
CtcflA2APF3 AC079644.1-201ENSMUST00000220586 405 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm46996-201ENSMUST00000220924 408 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 AC117949.2-201ENSMUST00000225900 584 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm25800-201ENSMUST00000082636 134 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CtcflA2APF3 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CtcflA2APF3 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CtcflA2APF3 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CtcflA2APF3 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CtcflA2APF3 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CtcflA2APF3 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CtcflA2APF3 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.22□□□□□ -1.73
CtcflA2APF3 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
CtcflA2APF3 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
CtcflA2APF3 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CtcflA2APF3 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CtcflA2APF3 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm15074-201ENSMUST00000117603 936 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm14890-201ENSMUST00000117660 676 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm11984-201ENSMUST00000118142 766 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm15357-201ENSMUST00000119160 285 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm15390-201ENSMUST00000120323 738 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm15227-201ENSMUST00000121844 399 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm6969-201ENSMUST00000140065 342 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm25824-201ENSMUST00000157092 121 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm23537-201ENSMUST00000157536 330 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Gm22530-201ENSMUST00000158820 118 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Ear-ps9-201ENSMUST00000161963 460 ntBASIC4.21□□□□□ -1.74
CtcflA2APF3 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CtcflA2APF3 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms