Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afb3S4R1G7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Gm42569-201ENSMUST00000200539 472 ntBASIC15.81■□□□□ 0.12
H2afb3S4R1G7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H2afb3S4R1G7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Gm7291-201ENSMUST00000199147 382 ntBASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2afb3S4R1G7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Gm6211-202ENSMUST00000167849 925 ntBASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Idnk-204ENSMUST00000226010 1898 ntBASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb3S4R1G7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb3S4R1G7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb3S4R1G7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb3S4R1G7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb3S4R1G7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb3S4R1G7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb3S4R1G7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb3S4R1G7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb3S4R1G7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb3S4R1G7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.78■□□□□ 0.12
H2afb3S4R1G7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb3S4R1G7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb3S4R1G7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.78■□□□□ 0.12
H2afb3S4R1G7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb3S4R1G7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms