Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm18959-201ENSMUST00000208954 655 ntBASIC17.75■□□□□ 0.43
Scn8aQ9WTU3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Scn8aQ9WTU3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Scn8aQ9WTU3 Gm18032-201ENSMUST00000222541 538 ntBASIC17.75■□□□□ 0.43
Scn8aQ9WTU3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn8aQ9WTU3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Scn8aQ9WTU3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn8aQ9WTU3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.74■□□□□ 0.43
Scn8aQ9WTU3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn8aQ9WTU3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn8aQ9WTU3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn8aQ9WTU3 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.74■□□□□ 0.43
Scn8aQ9WTU3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.74■□□□□ 0.43
Scn8aQ9WTU3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scn8aQ9WTU3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.74■□□□□ 0.43
Scn8aQ9WTU3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scn8aQ9WTU3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn8aQ9WTU3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Scn8aQ9WTU3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Scn8aQ9WTU3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Scn8aQ9WTU3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn8aQ9WTU3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scn8aQ9WTU3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Scn8aQ9WTU3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn8aQ9WTU3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scn8aQ9WTU3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scn8aQ9WTU3 Il3ra-202ENSMUST00000223589 738 ntBASIC17.72■□□□□ 0.43
Scn8aQ9WTU3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn8aQ9WTU3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Scn8aQ9WTU3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn8aQ9WTU3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn8aQ9WTU3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn8aQ9WTU3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn8aQ9WTU3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Scn8aQ9WTU3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.71■□□□□ 0.43
Scn8aQ9WTU3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scn8aQ9WTU3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.71■□□□□ 0.43
Scn8aQ9WTU3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Scn8aQ9WTU3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn8aQ9WTU3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn8aQ9WTU3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Scn8aQ9WTU3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn8aQ9WTU3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn8aQ9WTU3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn8aQ9WTU3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn8aQ9WTU3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Scn8aQ9WTU3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scn8aQ9WTU3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn8aQ9WTU3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn8aQ9WTU3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn8aQ9WTU3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn8aQ9WTU3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn8aQ9WTU3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn8aQ9WTU3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Scn8aQ9WTU3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn8aQ9WTU3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn8aQ9WTU3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn8aQ9WTU3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn8aQ9WTU3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Scn8aQ9WTU3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn8aQ9WTU3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.7■□□□□ 0.42
Scn8aQ9WTU3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn8aQ9WTU3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn8aQ9WTU3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn8aQ9WTU3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn8aQ9WTU3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.7■□□□□ 0.42
Scn8aQ9WTU3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.7■□□□□ 0.42
Scn8aQ9WTU3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn8aQ9WTU3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.7■□□□□ 0.42
Scn8aQ9WTU3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn8aQ9WTU3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn8aQ9WTU3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn8aQ9WTU3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn8aQ9WTU3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn8aQ9WTU3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn8aQ9WTU3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.69■□□□□ 0.42
Scn8aQ9WTU3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn8aQ9WTU3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Scn8aQ9WTU3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn8aQ9WTU3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms