Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm29791-202ENSMUST00000207888 369 ntBASIC17.65■□□□□ 0.42
Shroom3Q9QXN0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom3Q9QXN0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom3Q9QXN0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom3Q9QXN0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom3Q9QXN0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Shroom3Q9QXN0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.65■□□□□ 0.42
Shroom3Q9QXN0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom3Q9QXN0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom3Q9QXN0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom3Q9QXN0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Shroom3Q9QXN0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Gm10231-201ENSMUST00000181584 441 ntBASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Gm10175-202ENSMUST00000208752 441 ntBASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shroom3Q9QXN0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.63■□□□□ 0.41
Shroom3Q9QXN0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom3Q9QXN0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom3Q9QXN0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.63■□□□□ 0.41
Shroom3Q9QXN0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom3Q9QXN0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.63■□□□□ 0.41
Shroom3Q9QXN0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom3Q9QXN0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom3Q9QXN0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Shroom3Q9QXN0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom3Q9QXN0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom3Q9QXN0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom3Q9QXN0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom3Q9QXN0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom3Q9QXN0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom3Q9QXN0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shroom3Q9QXN0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.63■□□□□ 0.41
Shroom3Q9QXN0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 Gm37292-201ENSMUST00000192062 758 ntBASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shroom3Q9QXN0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Shroom3Q9QXN0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom3Q9QXN0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom3Q9QXN0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom3Q9QXN0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom3Q9QXN0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom3Q9QXN0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom3Q9QXN0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom3Q9QXN0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom3Q9QXN0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom3Q9QXN0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.61■□□□□ 0.41
Shroom3Q9QXN0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom3Q9QXN0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom3Q9QXN0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom3Q9QXN0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Shroom3Q9QXN0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom3Q9QXN0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shroom3Q9QXN0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shroom3Q9QXN0 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.6■□□□□ 0.41
Shroom3Q9QXN0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shroom3Q9QXN0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shroom3Q9QXN0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Shroom3Q9QXN0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shroom3Q9QXN0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shroom3Q9QXN0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.6■□□□□ 0.41
Shroom3Q9QXN0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shroom3Q9QXN0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shroom3Q9QXN0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shroom3Q9QXN0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shroom3Q9QXN0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shroom3Q9QXN0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.59■□□□□ 0.41
Shroom3Q9QXN0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms