Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx5Q9JL61 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx5Q9JL61 Gm12085-201ENSMUST00000119263 940 ntBASIC18.6■□□□□ 0.57
Rfx5Q9JL61 Gm24841-201ENSMUST00000158676 357 ntBASIC18.6■□□□□ 0.57
Rfx5Q9JL61 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.6■□□□□ 0.57
Rfx5Q9JL61 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Rfx5Q9JL61 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx5Q9JL61 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx5Q9JL61 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx5Q9JL61 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx5Q9JL61 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx5Q9JL61 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx5Q9JL61 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx5Q9JL61 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rfx5Q9JL61 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx5Q9JL61 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rfx5Q9JL61 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx5Q9JL61 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.59■□□□□ 0.57
Rfx5Q9JL61 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.59■□□□□ 0.57
Rfx5Q9JL61 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx5Q9JL61 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx5Q9JL61 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.59■□□□□ 0.57
Rfx5Q9JL61 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx5Q9JL61 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx5Q9JL61 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx5Q9JL61 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx5Q9JL61 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx5Q9JL61 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.58■□□□□ 0.57
Rfx5Q9JL61 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx5Q9JL61 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.58■□□□□ 0.57
Rfx5Q9JL61 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx5Q9JL61 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx5Q9JL61 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx5Q9JL61 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx5Q9JL61 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.58■□□□□ 0.56
Rfx5Q9JL61 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Rfx5Q9JL61 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx5Q9JL61 Gm37055-201ENSMUST00000191866 133 ntBASIC18.58■□□□□ 0.56
Rfx5Q9JL61 Gm3375-201ENSMUST00000203929 796 ntBASIC18.58■□□□□ 0.56
Rfx5Q9JL61 Timm23-208ENSMUST00000226683 750 ntBASIC18.58■□□□□ 0.56
Rfx5Q9JL61 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx5Q9JL61 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx5Q9JL61 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx5Q9JL61 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Rfx5Q9JL61 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx5Q9JL61 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx5Q9JL61 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx5Q9JL61 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.57■□□□□ 0.56
Rfx5Q9JL61 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx5Q9JL61 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx5Q9JL61 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.57■□□□□ 0.56
Rfx5Q9JL61 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx5Q9JL61 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx5Q9JL61 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx5Q9JL61 Odf3b-204ENSMUST00000227834 930 ntBASIC18.57■□□□□ 0.56
Rfx5Q9JL61 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx5Q9JL61 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx5Q9JL61 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx5Q9JL61 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.57■□□□□ 0.56
Rfx5Q9JL61 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx5Q9JL61 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx5Q9JL61 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx5Q9JL61 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.56■□□□□ 0.56
Rfx5Q9JL61 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.56■□□□□ 0.56
Rfx5Q9JL61 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx5Q9JL61 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx5Q9JL61 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rfx5Q9JL61 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx5Q9JL61 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx5Q9JL61 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.55■□□□□ 0.56
Rfx5Q9JL61 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rfx5Q9JL61 Gm38027-201ENSMUST00000192315 235 ntBASIC18.55■□□□□ 0.56
Rfx5Q9JL61 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.55■□□□□ 0.56
Rfx5Q9JL61 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx5Q9JL61 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx5Q9JL61 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rfx5Q9JL61 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx5Q9JL61 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.54■□□□□ 0.56
Rfx5Q9JL61 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rfx5Q9JL61 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx5Q9JL61 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx5Q9JL61 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx5Q9JL61 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx5Q9JL61 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.54■□□□□ 0.56
Rfx5Q9JL61 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx5Q9JL61 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx5Q9JL61 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx5Q9JL61 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx5Q9JL61 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx5Q9JL61 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx5Q9JL61 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx5Q9JL61 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx5Q9JL61 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx5Q9JL61 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx5Q9JL61 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.53■□□□□ 0.56
Rfx5Q9JL61 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.53■□□□□ 0.56
Rfx5Q9JL61 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx5Q9JL61 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.53■□□□□ 0.56
Rfx5Q9JL61 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx5Q9JL61 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms