Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl28Q9JIL2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl28Q9JIL2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl28Q9JIL2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl28Q9JIL2 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.21□□□□□ -0.13
Ccl28Q9JIL2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Ccl28Q9JIL2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Ccl28Q9JIL2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ccl28Q9JIL2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccl28Q9JIL2 Gm8969-201ENSMUST00000199694 526 ntBASIC14.21□□□□□ -0.13
Ccl28Q9JIL2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl28Q9JIL2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Ccl28Q9JIL2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ccl28Q9JIL2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccl28Q9JIL2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccl28Q9JIL2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccl28Q9JIL2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccl28Q9JIL2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccl28Q9JIL2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl28Q9JIL2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl28Q9JIL2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Gm15039-201ENSMUST00000118914 875 ntBASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccl28Q9JIL2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms