Protein–RNA interactions for Protein: Q9JHB3

Timp4, Metalloproteinase inhibitor 4, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp4Q9JHB3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Timp4Q9JHB3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.29■□□□□ 0.52
Timp4Q9JHB3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Timp4Q9JHB3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Timp4Q9JHB3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.29■□□□□ 0.52
Timp4Q9JHB3 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.29■□□□□ 0.52
Timp4Q9JHB3 Mir8112-201ENSMUST00000184382 131 ntBASIC18.29■□□□□ 0.52
Timp4Q9JHB3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Timp4Q9JHB3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Timp4Q9JHB3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Timp4Q9JHB3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Timp4Q9JHB3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Timp4Q9JHB3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Timp4Q9JHB3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Timp4Q9JHB3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Timp4Q9JHB3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Timp4Q9JHB3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Timp4Q9JHB3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Timp4Q9JHB3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Timp4Q9JHB3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Timp4Q9JHB3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Timp4Q9JHB3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Timp4Q9JHB3 Gm27463-201ENSMUST00000183569 57 ntBASIC18.28■□□□□ 0.52
Timp4Q9JHB3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.28■□□□□ 0.52
Timp4Q9JHB3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Timp4Q9JHB3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Timp4Q9JHB3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Timp4Q9JHB3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Timp4Q9JHB3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.28■□□□□ 0.52
Timp4Q9JHB3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.28■□□□□ 0.52
Timp4Q9JHB3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Timp4Q9JHB3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Timp4Q9JHB3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Timp4Q9JHB3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Timp4Q9JHB3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Timp4Q9JHB3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Timp4Q9JHB3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Timp4Q9JHB3 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.27■□□□□ 0.52
Timp4Q9JHB3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.27■□□□□ 0.52
Timp4Q9JHB3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.27■□□□□ 0.52
Timp4Q9JHB3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Timp4Q9JHB3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Timp4Q9JHB3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Timp4Q9JHB3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Timp4Q9JHB3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Timp4Q9JHB3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Timp4Q9JHB3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Timp4Q9JHB3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Timp4Q9JHB3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.26■□□□□ 0.51
Timp4Q9JHB3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Timp4Q9JHB3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Timp4Q9JHB3 Gm7791-201ENSMUST00000219066 539 ntBASIC18.26■□□□□ 0.51
Timp4Q9JHB3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Timp4Q9JHB3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Timp4Q9JHB3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Timp4Q9JHB3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.26■□□□□ 0.51
Timp4Q9JHB3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Timp4Q9JHB3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Timp4Q9JHB3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Timp4Q9JHB3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Timp4Q9JHB3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Timp4Q9JHB3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Timp4Q9JHB3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Timp4Q9JHB3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Timp4Q9JHB3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Timp4Q9JHB3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Timp4Q9JHB3 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.25■□□□□ 0.51
Timp4Q9JHB3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Timp4Q9JHB3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Timp4Q9JHB3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Timp4Q9JHB3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Timp4Q9JHB3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Timp4Q9JHB3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Timp4Q9JHB3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Timp4Q9JHB3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Timp4Q9JHB3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Timp4Q9JHB3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.24■□□□□ 0.51
Timp4Q9JHB3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Timp4Q9JHB3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Timp4Q9JHB3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Timp4Q9JHB3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.24■□□□□ 0.51
Timp4Q9JHB3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Timp4Q9JHB3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.24■□□□□ 0.51
Timp4Q9JHB3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Timp4Q9JHB3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Timp4Q9JHB3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Timp4Q9JHB3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.24■□□□□ 0.51
Timp4Q9JHB3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Timp4Q9JHB3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Timp4Q9JHB3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Timp4Q9JHB3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Timp4Q9JHB3 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.23■□□□□ 0.51
Timp4Q9JHB3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Timp4Q9JHB3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Timp4Q9JHB3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.23■□□□□ 0.51
Timp4Q9JHB3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.23■□□□□ 0.51
Timp4Q9JHB3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Timp4Q9JHB3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Timp4Q9JHB3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Timp4Q9JHB3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms