Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Trim54Q9ERP3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.02■□□□□ 0.64
Trim54Q9ERP3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim54Q9ERP3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim54Q9ERP3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trim54Q9ERP3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
Trim54Q9ERP3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.02■□□□□ 0.63
Trim54Q9ERP3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trim54Q9ERP3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trim54Q9ERP3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim54Q9ERP3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim54Q9ERP3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trim54Q9ERP3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim54Q9ERP3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim54Q9ERP3 Gm2274-201ENSMUST00000184539 609 ntBASIC19.01■□□□□ 0.63
Trim54Q9ERP3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim54Q9ERP3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Trim54Q9ERP3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim54Q9ERP3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim54Q9ERP3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim54Q9ERP3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim54Q9ERP3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim54Q9ERP3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim54Q9ERP3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim54Q9ERP3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim54Q9ERP3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trim54Q9ERP3 Mir5130-201ENSMUST00000175160 84 ntBASIC19■□□□□ 0.63
Trim54Q9ERP3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19■□□□□ 0.63
Trim54Q9ERP3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim54Q9ERP3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trim54Q9ERP3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trim54Q9ERP3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim54Q9ERP3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim54Q9ERP3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim54Q9ERP3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trim54Q9ERP3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim54Q9ERP3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Trim54Q9ERP3 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.99■□□□□ 0.63
Trim54Q9ERP3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Trim54Q9ERP3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.99■□□□□ 0.63
Trim54Q9ERP3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.99■□□□□ 0.63
Trim54Q9ERP3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim54Q9ERP3 Gm18032-201ENSMUST00000222541 538 ntBASIC18.99■□□□□ 0.63
Trim54Q9ERP3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim54Q9ERP3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim54Q9ERP3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trim54Q9ERP3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim54Q9ERP3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim54Q9ERP3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim54Q9ERP3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim54Q9ERP3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim54Q9ERP3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 Gm21362-201ENSMUST00000194272 928 ntBASIC18.98■□□□□ 0.63
Trim54Q9ERP3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trim54Q9ERP3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim54Q9ERP3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim54Q9ERP3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim54Q9ERP3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim54Q9ERP3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trim54Q9ERP3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trim54Q9ERP3 Gm10418-201ENSMUST00000100943 576 ntBASIC18.97■□□□□ 0.63
Trim54Q9ERP3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.97■□□□□ 0.63
Trim54Q9ERP3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trim54Q9ERP3 Gm23634-201ENSMUST00000175071 91 ntBASIC18.97■□□□□ 0.63
Trim54Q9ERP3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Trim54Q9ERP3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim54Q9ERP3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim54Q9ERP3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim54Q9ERP3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trim54Q9ERP3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim54Q9ERP3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim54Q9ERP3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim54Q9ERP3 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.97■□□□□ 0.63
Trim54Q9ERP3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trim54Q9ERP3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Trim54Q9ERP3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim54Q9ERP3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim54Q9ERP3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim54Q9ERP3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.96■□□□□ 0.63
Trim54Q9ERP3 Gm24841-201ENSMUST00000158676 357 ntBASIC18.96■□□□□ 0.63
Trim54Q9ERP3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim54Q9ERP3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms