Protein–RNA interactions for Protein: Q9ER62

Tnfrsf22, Tumor necrosis factor receptor superfamily member 22, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf22Q9ER62 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf22Q9ER62 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf22Q9ER62 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tnfrsf22Q9ER62 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
Tnfrsf22Q9ER62 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Tnfrsf22Q9ER62 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf22Q9ER62 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf22Q9ER62 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf22Q9ER62 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.45■□□□□ 0.22
Tnfrsf22Q9ER62 Gm13401-201ENSMUST00000117074 291 ntBASIC16.45■□□□□ 0.22
Tnfrsf22Q9ER62 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.45■□□□□ 0.22
Tnfrsf22Q9ER62 Gm11539-201ENSMUST00000119837 557 ntBASIC16.45■□□□□ 0.22
Tnfrsf22Q9ER62 Gm13436-201ENSMUST00000120418 567 ntBASIC16.45■□□□□ 0.22
Tnfrsf22Q9ER62 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.45■□□□□ 0.22
Tnfrsf22Q9ER62 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf22Q9ER62 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Tnfrsf22Q9ER62 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Tnfrsf22Q9ER62 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.45■□□□□ 0.22
Tnfrsf22Q9ER62 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Tnfrsf22Q9ER62 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf22Q9ER62 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf22Q9ER62 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Tnfrsf22Q9ER62 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf22Q9ER62 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tnfrsf22Q9ER62 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf22Q9ER62 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf22Q9ER62 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf22Q9ER62 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Tnfrsf22Q9ER62 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Tnfrsf22Q9ER62 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf22Q9ER62 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf22Q9ER62 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf22Q9ER62 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf22Q9ER62 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf22Q9ER62 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf22Q9ER62 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf22Q9ER62 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tnfrsf22Q9ER62 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Tnfrsf22Q9ER62 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Gm11643-201ENSMUST00000119578 864 ntBASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Odf3b-204ENSMUST00000227834 930 ntBASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tnfrsf22Q9ER62 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tnfrsf22Q9ER62 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf22Q9ER62 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf22Q9ER62 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf22Q9ER62 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf22Q9ER62 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf22Q9ER62 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf22Q9ER62 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Tnfrsf22Q9ER62 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.42■□□□□ 0.22
Tnfrsf22Q9ER62 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf22Q9ER62 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf22Q9ER62 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Tnfrsf22Q9ER62 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf22Q9ER62 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf22Q9ER62 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf22Q9ER62 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf22Q9ER62 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Tnfrsf22Q9ER62 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tnfrsf22Q9ER62 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.42■□□□□ 0.22
Tnfrsf22Q9ER62 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf22Q9ER62 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf22Q9ER62 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf22Q9ER62 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf22Q9ER62 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf22Q9ER62 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf22Q9ER62 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf22Q9ER62 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf22Q9ER62 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf22Q9ER62 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf22Q9ER62 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf22Q9ER62 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf22Q9ER62 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tnfrsf22Q9ER62 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf22Q9ER62 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.41■□□□□ 0.22
Tnfrsf22Q9ER62 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf22Q9ER62 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tnfrsf22Q9ER62 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Tnfrsf22Q9ER62 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms