Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rrp8Q9DB85 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rrp8Q9DB85 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rrp8Q9DB85 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.22■□□□□ 0.35
Rrp8Q9DB85 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rrp8Q9DB85 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rrp8Q9DB85 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rrp8Q9DB85 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rrp8Q9DB85 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rrp8Q9DB85 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rrp8Q9DB85 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rrp8Q9DB85 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.22■□□□□ 0.35
Rrp8Q9DB85 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Rrp8Q9DB85 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rrp8Q9DB85 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rrp8Q9DB85 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rrp8Q9DB85 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rrp8Q9DB85 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rrp8Q9DB85 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.21■□□□□ 0.35
Rrp8Q9DB85 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rrp8Q9DB85 Gm13401-201ENSMUST00000117074 291 ntBASIC17.21■□□□□ 0.35
Rrp8Q9DB85 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.21■□□□□ 0.35
Rrp8Q9DB85 Gm17661-201ENSMUST00000170317 270 ntBASIC17.21■□□□□ 0.35
Rrp8Q9DB85 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.21■□□□□ 0.35
Rrp8Q9DB85 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rrp8Q9DB85 Gm21559-201ENSMUST00000220638 855 ntBASIC17.21■□□□□ 0.35
Rrp8Q9DB85 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.21■□□□□ 0.35
Rrp8Q9DB85 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rrp8Q9DB85 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rrp8Q9DB85 Gm8587-201ENSMUST00000076538 843 ntBASIC17.21■□□□□ 0.35
Rrp8Q9DB85 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rrp8Q9DB85 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rrp8Q9DB85 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rrp8Q9DB85 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rrp8Q9DB85 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Rrp8Q9DB85 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rrp8Q9DB85 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rrp8Q9DB85 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rrp8Q9DB85 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rrp8Q9DB85 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.2■□□□□ 0.34
Rrp8Q9DB85 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rrp8Q9DB85 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rrp8Q9DB85 BC021767-201ENSMUST00000126387 1716 ntBASIC17.2■□□□□ 0.34
Rrp8Q9DB85 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rrp8Q9DB85 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.2■□□□□ 0.34
Rrp8Q9DB85 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rrp8Q9DB85 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Rrp8Q9DB85 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rrp8Q9DB85 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rrp8Q9DB85 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rrp8Q9DB85 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrp8Q9DB85 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrp8Q9DB85 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrp8Q9DB85 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrp8Q9DB85 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.19■□□□□ 0.34
Rrp8Q9DB85 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrp8Q9DB85 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rrp8Q9DB85 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.19■□□□□ 0.34
Rrp8Q9DB85 Gm29791-202ENSMUST00000207888 369 ntBASIC17.19■□□□□ 0.34
Rrp8Q9DB85 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrp8Q9DB85 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrp8Q9DB85 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrp8Q9DB85 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rrp8Q9DB85 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rrp8Q9DB85 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrp8Q9DB85 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrp8Q9DB85 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rrp8Q9DB85 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rrp8Q9DB85 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rrp8Q9DB85 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rrp8Q9DB85 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rrp8Q9DB85 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.17■□□□□ 0.34
Rrp8Q9DB85 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rrp8Q9DB85 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rrp8Q9DB85 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rrp8Q9DB85 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms