Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Gm15378-201ENSMUST00000121894 207 ntBASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Gm18025-201ENSMUST00000221733 862 ntBASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp2aQ9DB34 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Chmp2aQ9DB34 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Chmp2aQ9DB34 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Chmp2aQ9DB34 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.33■□□□□ 0.52
Chmp2aQ9DB34 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Rarb-207ENSMUST00000225921 2756 ntBASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Chmp2aQ9DB34 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp2aQ9DB34 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Chmp2aQ9DB34 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp2aQ9DB34 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp2aQ9DB34 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp2aQ9DB34 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp2aQ9DB34 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.31■□□□□ 0.52
Chmp2aQ9DB34 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp2aQ9DB34 Mir6349-201ENSMUST00000184059 97 ntBASIC18.31■□□□□ 0.52
Chmp2aQ9DB34 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.31■□□□□ 0.52
Chmp2aQ9DB34 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp2aQ9DB34 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.31■□□□□ 0.52
Chmp2aQ9DB34 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.31■□□□□ 0.52
Chmp2aQ9DB34 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp2aQ9DB34 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Chmp2aQ9DB34 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Chmp2aQ9DB34 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2aQ9DB34 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2aQ9DB34 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2aQ9DB34 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.3■□□□□ 0.52
Chmp2aQ9DB34 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2aQ9DB34 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.3■□□□□ 0.52
Chmp2aQ9DB34 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.3■□□□□ 0.52
Chmp2aQ9DB34 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
Chmp2aQ9DB34 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2aQ9DB34 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2aQ9DB34 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2aQ9DB34 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2aQ9DB34 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2aQ9DB34 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2aQ9DB34 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2aQ9DB34 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2aQ9DB34 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Chmp2aQ9DB34 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Chmp2aQ9DB34 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Gm43183-201ENSMUST00000200632 547 ntBASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Chmp2aQ9DB34 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms