Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Stag1Q9D3E6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Stag1Q9D3E6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Stag1Q9D3E6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Stag1Q9D3E6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Stag1Q9D3E6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Stag1Q9D3E6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.95■□□□□ 0.94
Stag1Q9D3E6 Gm7791-201ENSMUST00000219066 539 ntBASIC20.95■□□□□ 0.94
Stag1Q9D3E6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Stag1Q9D3E6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Stag1Q9D3E6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Stag1Q9D3E6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Stag1Q9D3E6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Stag1Q9D3E6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Stag1Q9D3E6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Stag1Q9D3E6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Stag1Q9D3E6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Stag1Q9D3E6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Stag1Q9D3E6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Stag1Q9D3E6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Stag1Q9D3E6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Stag1Q9D3E6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Stag1Q9D3E6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Stag1Q9D3E6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Stag1Q9D3E6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.93■□□□□ 0.94
Stag1Q9D3E6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Stag1Q9D3E6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.93■□□□□ 0.94
Stag1Q9D3E6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Stag1Q9D3E6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Stag1Q9D3E6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Stag1Q9D3E6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Stag1Q9D3E6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Stag1Q9D3E6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Stag1Q9D3E6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Stag1Q9D3E6 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.92■□□□□ 0.94
Stag1Q9D3E6 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.92■□□□□ 0.94
Stag1Q9D3E6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Stag1Q9D3E6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Stag1Q9D3E6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Stag1Q9D3E6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Stag1Q9D3E6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Stag1Q9D3E6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Stag1Q9D3E6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Stag1Q9D3E6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Stag1Q9D3E6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Stag1Q9D3E6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Stag1Q9D3E6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Stag1Q9D3E6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Stag1Q9D3E6 AA414768-201ENSMUST00000121924 1257 ntBASIC20.91■□□□□ 0.94
Stag1Q9D3E6 Gm22697-201ENSMUST00000175194 63 ntBASIC20.91■□□□□ 0.94
Stag1Q9D3E6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.91■□□□□ 0.94
Stag1Q9D3E6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Stag1Q9D3E6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Stag1Q9D3E6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Stag1Q9D3E6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Stag1Q9D3E6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Stag1Q9D3E6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Stag1Q9D3E6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Stag1Q9D3E6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Stag1Q9D3E6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Stag1Q9D3E6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Stag1Q9D3E6 Gm16061-201ENSMUST00000122167 857 ntBASIC20.9■□□□□ 0.94
Stag1Q9D3E6 Gm7367-201ENSMUST00000057611 492 ntBASIC20.9■□□□□ 0.94
Stag1Q9D3E6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Stag1Q9D3E6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Stag1Q9D3E6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Stag1Q9D3E6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Stag1Q9D3E6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Stag1Q9D3E6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Stag1Q9D3E6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Stag1Q9D3E6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Stag1Q9D3E6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Stag1Q9D3E6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Stag1Q9D3E6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Stag1Q9D3E6 Gm18101-201ENSMUST00000215769 548 ntBASIC20.89■□□□□ 0.93
Stag1Q9D3E6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Stag1Q9D3E6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Stag1Q9D3E6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms