Protein–RNA interactions for Protein: Q9D1P4

Chordc1, Cysteine and histidine-rich domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chordc1Q9D1P4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chordc1Q9D1P4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chordc1Q9D1P4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Chordc1Q9D1P4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chordc1Q9D1P4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chordc1Q9D1P4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chordc1Q9D1P4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chordc1Q9D1P4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Chordc1Q9D1P4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.64■□□□□ 0.57
Chordc1Q9D1P4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.64■□□□□ 0.57
Chordc1Q9D1P4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chordc1Q9D1P4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chordc1Q9D1P4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chordc1Q9D1P4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Chordc1Q9D1P4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chordc1Q9D1P4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chordc1Q9D1P4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Chordc1Q9D1P4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.64■□□□□ 0.57
Chordc1Q9D1P4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chordc1Q9D1P4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Chordc1Q9D1P4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chordc1Q9D1P4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chordc1Q9D1P4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.62■□□□□ 0.57
Chordc1Q9D1P4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Chordc1Q9D1P4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chordc1Q9D1P4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chordc1Q9D1P4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chordc1Q9D1P4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Chordc1Q9D1P4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chordc1Q9D1P4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.62■□□□□ 0.57
Chordc1Q9D1P4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chordc1Q9D1P4 Gm37292-201ENSMUST00000192062 758 ntBASIC18.62■□□□□ 0.57
Chordc1Q9D1P4 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.62■□□□□ 0.57
Chordc1Q9D1P4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Chordc1Q9D1P4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chordc1Q9D1P4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chordc1Q9D1P4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Chordc1Q9D1P4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chordc1Q9D1P4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chordc1Q9D1P4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Chordc1Q9D1P4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chordc1Q9D1P4 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.61■□□□□ 0.57
Chordc1Q9D1P4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.61■□□□□ 0.57
Chordc1Q9D1P4 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.61■□□□□ 0.57
Chordc1Q9D1P4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chordc1Q9D1P4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.61■□□□□ 0.57
Chordc1Q9D1P4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chordc1Q9D1P4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chordc1Q9D1P4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.61■□□□□ 0.57
Chordc1Q9D1P4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chordc1Q9D1P4 Mir2861-201ENSMUST00000175539 82 ntBASIC18.61■□□□□ 0.57
Chordc1Q9D1P4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chordc1Q9D1P4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chordc1Q9D1P4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chordc1Q9D1P4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chordc1Q9D1P4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chordc1Q9D1P4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Chordc1Q9D1P4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chordc1Q9D1P4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chordc1Q9D1P4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chordc1Q9D1P4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chordc1Q9D1P4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Chordc1Q9D1P4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chordc1Q9D1P4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.6■□□□□ 0.57
Chordc1Q9D1P4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Chordc1Q9D1P4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chordc1Q9D1P4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chordc1Q9D1P4 Mir6349-201ENSMUST00000184059 97 ntBASIC18.6■□□□□ 0.57
Chordc1Q9D1P4 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.6■□□□□ 0.57
Chordc1Q9D1P4 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.6■□□□□ 0.57
Chordc1Q9D1P4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.6■□□□□ 0.57
Chordc1Q9D1P4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.6■□□□□ 0.57
Chordc1Q9D1P4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Chordc1Q9D1P4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chordc1Q9D1P4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chordc1Q9D1P4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chordc1Q9D1P4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chordc1Q9D1P4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms