Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1bQ9D0N7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1bQ9D0N7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1bQ9D0N7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Chaf1bQ9D0N7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chaf1bQ9D0N7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1bQ9D0N7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1bQ9D0N7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1bQ9D0N7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1bQ9D0N7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1bQ9D0N7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1bQ9D0N7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Chaf1bQ9D0N7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.57■□□□□ 0.24
Chaf1bQ9D0N7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1bQ9D0N7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1bQ9D0N7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1bQ9D0N7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1bQ9D0N7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1bQ9D0N7 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.57■□□□□ 0.24
Chaf1bQ9D0N7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1bQ9D0N7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Chaf1bQ9D0N7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Chaf1bQ9D0N7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1bQ9D0N7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Chaf1bQ9D0N7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1bQ9D0N7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1bQ9D0N7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1bQ9D0N7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.56■□□□□ 0.24
Chaf1bQ9D0N7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1bQ9D0N7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1bQ9D0N7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1bQ9D0N7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1bQ9D0N7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Chaf1bQ9D0N7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1bQ9D0N7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1bQ9D0N7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1bQ9D0N7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1bQ9D0N7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chaf1bQ9D0N7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chaf1bQ9D0N7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Idnk-204ENSMUST00000226010 1898 ntBASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Gm13146-201ENSMUST00000118508 780 ntBASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chaf1bQ9D0N7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chaf1bQ9D0N7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.53■□□□□ 0.24
Chaf1bQ9D0N7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chaf1bQ9D0N7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Chaf1bQ9D0N7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chaf1bQ9D0N7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chaf1bQ9D0N7 Gm13534-201ENSMUST00000121169 513 ntBASIC16.53■□□□□ 0.24
Chaf1bQ9D0N7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chaf1bQ9D0N7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chaf1bQ9D0N7 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.53■□□□□ 0.24
Chaf1bQ9D0N7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chaf1bQ9D0N7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chaf1bQ9D0N7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.53■□□□□ 0.24
Chaf1bQ9D0N7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms