Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim13Q9CYB0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim13Q9CYB0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim13Q9CYB0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim13Q9CYB0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim13Q9CYB0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim13Q9CYB0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Trim13Q9CYB0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trim13Q9CYB0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim13Q9CYB0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim13Q9CYB0 Gm13534-201ENSMUST00000121169 513 ntBASIC16.27■□□□□ 0.2
Trim13Q9CYB0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim13Q9CYB0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Trim13Q9CYB0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.27■□□□□ 0.2
Trim13Q9CYB0 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.27■□□□□ 0.2
Trim13Q9CYB0 Gm43060-201ENSMUST00000200621 289 ntBASIC16.27■□□□□ 0.2
Trim13Q9CYB0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.27■□□□□ 0.2
Trim13Q9CYB0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.27■□□□□ 0.2
Trim13Q9CYB0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim13Q9CYB0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trim13Q9CYB0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim13Q9CYB0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim13Q9CYB0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim13Q9CYB0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim13Q9CYB0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim13Q9CYB0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim13Q9CYB0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim13Q9CYB0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.27■□□□□ 0.19
Trim13Q9CYB0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim13Q9CYB0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim13Q9CYB0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trim13Q9CYB0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim13Q9CYB0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim13Q9CYB0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim13Q9CYB0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim13Q9CYB0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim13Q9CYB0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim13Q9CYB0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim13Q9CYB0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim13Q9CYB0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim13Q9CYB0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim13Q9CYB0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim13Q9CYB0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim13Q9CYB0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim13Q9CYB0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim13Q9CYB0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim13Q9CYB0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim13Q9CYB0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms