Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Ssu72Q9CY97 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ssu72Q9CY97 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Ssu72Q9CY97 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ssu72Q9CY97 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ssu72Q9CY97 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssu72Q9CY97 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.51■□□□□ 0.39
Ssu72Q9CY97 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssu72Q9CY97 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssu72Q9CY97 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssu72Q9CY97 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ssu72Q9CY97 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssu72Q9CY97 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ssu72Q9CY97 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ssu72Q9CY97 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.5■□□□□ 0.39
Ssu72Q9CY97 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssu72Q9CY97 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssu72Q9CY97 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.5■□□□□ 0.39
Ssu72Q9CY97 Nespas-201ENSMUST00000143738 1083 ntBASIC17.5■□□□□ 0.39
Ssu72Q9CY97 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssu72Q9CY97 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ssu72Q9CY97 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ssu72Q9CY97 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssu72Q9CY97 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssu72Q9CY97 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ssu72Q9CY97 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ssu72Q9CY97 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssu72Q9CY97 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssu72Q9CY97 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ssu72Q9CY97 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.49■□□□□ 0.39
Ssu72Q9CY97 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.49■□□□□ 0.39
Ssu72Q9CY97 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssu72Q9CY97 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssu72Q9CY97 Gm38285-201ENSMUST00000192928 922 ntBASIC17.49■□□□□ 0.39
Ssu72Q9CY97 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.49■□□□□ 0.39
Ssu72Q9CY97 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssu72Q9CY97 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.49■□□□□ 0.39
Ssu72Q9CY97 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssu72Q9CY97 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssu72Q9CY97 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssu72Q9CY97 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssu72Q9CY97 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssu72Q9CY97 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.49■□□□□ 0.39
Ssu72Q9CY97 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Ssu72Q9CY97 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ssu72Q9CY97 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssu72Q9CY97 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ssu72Q9CY97 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ssu72Q9CY97 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ssu72Q9CY97 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssu72Q9CY97 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ssu72Q9CY97 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.48■□□□□ 0.39
Ssu72Q9CY97 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ssu72Q9CY97 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.48■□□□□ 0.39
Ssu72Q9CY97 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssu72Q9CY97 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ssu72Q9CY97 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.48■□□□□ 0.39
Ssu72Q9CY97 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ssu72Q9CY97 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssu72Q9CY97 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssu72Q9CY97 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssu72Q9CY97 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssu72Q9CY97 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssu72Q9CY97 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ssu72Q9CY97 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssu72Q9CY97 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.47■□□□□ 0.39
Ssu72Q9CY97 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssu72Q9CY97 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssu72Q9CY97 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssu72Q9CY97 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ssu72Q9CY97 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssu72Q9CY97 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ssu72Q9CY97 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ssu72Q9CY97 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssu72Q9CY97 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssu72Q9CY97 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssu72Q9CY97 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssu72Q9CY97 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.46■□□□□ 0.39
Ssu72Q9CY97 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssu72Q9CY97 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.46■□□□□ 0.39
Ssu72Q9CY97 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.46■□□□□ 0.39
Ssu72Q9CY97 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.46■□□□□ 0.39
Ssu72Q9CY97 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssu72Q9CY97 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ssu72Q9CY97 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ssu72Q9CY97 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssu72Q9CY97 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssu72Q9CY97 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ssu72Q9CY97 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssu72Q9CY97 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssu72Q9CY97 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssu72Q9CY97 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssu72Q9CY97 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssu72Q9CY97 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Ssu72Q9CY97 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ssu72Q9CY97 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssu72Q9CY97 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssu72Q9CY97 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ssu72Q9CY97 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ssu72Q9CY97 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms