Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim34aQ99PP6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim34aQ99PP6 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.71■■□□□ 1.07
Trim34aQ99PP6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Trim34aQ99PP6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC21.71■■□□□ 1.07
Trim34aQ99PP6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim34aQ99PP6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Trim34aQ99PP6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim34aQ99PP6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim34aQ99PP6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim34aQ99PP6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Trim34aQ99PP6 Gm8258-201ENSMUST00000055593 1449 ntBASIC21.71■■□□□ 1.07
Trim34aQ99PP6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Trim34aQ99PP6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Trim34aQ99PP6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Trim34aQ99PP6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim34aQ99PP6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim34aQ99PP6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim34aQ99PP6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim34aQ99PP6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Trim34aQ99PP6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC21.7■■□□□ 1.06
Trim34aQ99PP6 Mir1668-201ENSMUST00000184114 107 ntBASIC21.7■■□□□ 1.06
Trim34aQ99PP6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim34aQ99PP6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
Trim34aQ99PP6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim34aQ99PP6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trim34aQ99PP6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim34aQ99PP6 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.69■■□□□ 1.06
Trim34aQ99PP6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim34aQ99PP6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim34aQ99PP6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim34aQ99PP6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.69■■□□□ 1.06
Trim34aQ99PP6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim34aQ99PP6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34aQ99PP6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34aQ99PP6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34aQ99PP6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34aQ99PP6 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.68■■□□□ 1.06
Trim34aQ99PP6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34aQ99PP6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34aQ99PP6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34aQ99PP6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34aQ99PP6 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.68■■□□□ 1.06
Trim34aQ99PP6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34aQ99PP6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34aQ99PP6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34aQ99PP6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34aQ99PP6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34aQ99PP6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim34aQ99PP6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim34aQ99PP6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Trim34aQ99PP6 Gm17661-201ENSMUST00000170317 270 ntBASIC21.67■■□□□ 1.06
Trim34aQ99PP6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.67■■□□□ 1.06
Trim34aQ99PP6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim34aQ99PP6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim34aQ99PP6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim34aQ99PP6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim34aQ99PP6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim34aQ99PP6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim34aQ99PP6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim34aQ99PP6 Gm7284-201ENSMUST00000131667 944 ntBASIC21.66■■□□□ 1.06
Trim34aQ99PP6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC21.66■■□□□ 1.06
Trim34aQ99PP6 Ank2-226ENSMUST00000189368 339 ntBASIC21.66■■□□□ 1.06
Trim34aQ99PP6 Gm5587-201ENSMUST00000206270 674 ntBASIC21.66■■□□□ 1.06
Trim34aQ99PP6 Gm7213-201ENSMUST00000215977 950 ntBASIC21.66■■□□□ 1.06
Trim34aQ99PP6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim34aQ99PP6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim34aQ99PP6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim34aQ99PP6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim34aQ99PP6 Gm9103-201ENSMUST00000119371 405 ntBASIC21.65■■□□□ 1.06
Trim34aQ99PP6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
Trim34aQ99PP6 Gm27741-201ENSMUST00000185060 237 ntBASIC21.65■■□□□ 1.06
Trim34aQ99PP6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim34aQ99PP6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim34aQ99PP6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Trim34aQ99PP6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Trim34aQ99PP6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC21.65■■□□□ 1.06
Trim34aQ99PP6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim34aQ99PP6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim34aQ99PP6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
Trim34aQ99PP6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim34aQ99PP6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim34aQ99PP6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Trim34aQ99PP6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim34aQ99PP6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim34aQ99PP6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim34aQ99PP6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.64■■□□□ 1.06
Trim34aQ99PP6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Trim34aQ99PP6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim34aQ99PP6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim34aQ99PP6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim34aQ99PP6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim34aQ99PP6 Golph3-205ENSMUST00000228671 2842 ntBASIC21.64■■□□□ 1.05
Trim34aQ99PP6 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.64■■□□□ 1.05
Trim34aQ99PP6 Gm9013-201ENSMUST00000132939 882 ntBASIC21.64■■□□□ 1.05
Trim34aQ99PP6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC21.64■■□□□ 1.05
Trim34aQ99PP6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trim34aQ99PP6 AC154471.1-201ENSMUST00000224418 436 ntBASIC21.64■■□□□ 1.05
Trim34aQ99PP6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim34aQ99PP6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms