Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd1Q99J36 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Thumpd1Q99J36 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd1Q99J36 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd1Q99J36 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.72■□□□□ 0.11
Thumpd1Q99J36 Gm45417-201ENSMUST00000209533 758 ntBASIC15.72■□□□□ 0.11
Thumpd1Q99J36 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.72■□□□□ 0.11
Thumpd1Q99J36 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd1Q99J36 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.72■□□□□ 0.11
Thumpd1Q99J36 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd1Q99J36 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd1Q99J36 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd1Q99J36 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd1Q99J36 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Thumpd1Q99J36 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Thumpd1Q99J36 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Thumpd1Q99J36 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Thumpd1Q99J36 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Thumpd1Q99J36 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Thumpd1Q99J36 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Thumpd1Q99J36 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Thumpd1Q99J36 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Thumpd1Q99J36 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Thumpd1Q99J36 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Thumpd1Q99J36 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Thumpd1Q99J36 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Thumpd1Q99J36 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Thumpd1Q99J36 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Thumpd1Q99J36 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Thumpd1Q99J36 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Thumpd1Q99J36 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Thumpd1Q99J36 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Thumpd1Q99J36 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.69■□□□□ 0.1
Thumpd1Q99J36 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 Haglr-201ENSMUST00000100000 2085 ntBASIC15.68■□□□□ 0.1
Thumpd1Q99J36 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Thumpd1Q99J36 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms