Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha2Q91Y17 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdha2Q91Y17 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha2Q91Y17 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Pcdha2Q91Y17 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdha2Q91Y17 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Pcdha2Q91Y17 Timm23-208ENSMUST00000226683 750 ntBASIC18.76■□□□□ 0.59
Pcdha2Q91Y17 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.76■□□□□ 0.59
Pcdha2Q91Y17 Odf3b-204ENSMUST00000227834 930 ntBASIC18.76■□□□□ 0.59
Pcdha2Q91Y17 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha2Q91Y17 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdha2Q91Y17 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha2Q91Y17 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha2Q91Y17 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdha2Q91Y17 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.75■□□□□ 0.59
Pcdha2Q91Y17 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha2Q91Y17 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha2Q91Y17 Gm12085-201ENSMUST00000119263 940 ntBASIC18.75■□□□□ 0.59
Pcdha2Q91Y17 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha2Q91Y17 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdha2Q91Y17 Gm3375-201ENSMUST00000203929 796 ntBASIC18.75■□□□□ 0.59
Pcdha2Q91Y17 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.75■□□□□ 0.59
Pcdha2Q91Y17 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha2Q91Y17 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha2Q91Y17 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha2Q91Y17 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.75■□□□□ 0.59
Pcdha2Q91Y17 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdha2Q91Y17 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.74■□□□□ 0.59
Pcdha2Q91Y17 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha2Q91Y17 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.74■□□□□ 0.59
Pcdha2Q91Y17 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha2Q91Y17 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha2Q91Y17 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdha2Q91Y17 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha2Q91Y17 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdha2Q91Y17 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha2Q91Y17 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha2Q91Y17 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdha2Q91Y17 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdha2Q91Y17 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha2Q91Y17 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha2Q91Y17 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.73■□□□□ 0.59
Pcdha2Q91Y17 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha2Q91Y17 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha2Q91Y17 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha2Q91Y17 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdha2Q91Y17 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha2Q91Y17 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdha2Q91Y17 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha2Q91Y17 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha2Q91Y17 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdha2Q91Y17 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha2Q91Y17 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha2Q91Y17 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdha2Q91Y17 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdha2Q91Y17 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha2Q91Y17 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.72■□□□□ 0.59
Pcdha2Q91Y17 Gm37055-201ENSMUST00000191866 133 ntBASIC18.72■□□□□ 0.59
Pcdha2Q91Y17 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.72■□□□□ 0.59
Pcdha2Q91Y17 Gm38027-201ENSMUST00000192315 235 ntBASIC18.72■□□□□ 0.59
Pcdha2Q91Y17 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha2Q91Y17 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha2Q91Y17 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdha2Q91Y17 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha2Q91Y17 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha2Q91Y17 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha2Q91Y17 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha2Q91Y17 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha2Q91Y17 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha2Q91Y17 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha2Q91Y17 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.71■□□□□ 0.59
Pcdha2Q91Y17 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdha2Q91Y17 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha2Q91Y17 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha2Q91Y17 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha2Q91Y17 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha2Q91Y17 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.71■□□□□ 0.59
Pcdha2Q91Y17 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdha2Q91Y17 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pcdha2Q91Y17 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pcdha2Q91Y17 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha2Q91Y17 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha2Q91Y17 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha2Q91Y17 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha2Q91Y17 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdha2Q91Y17 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pcdha2Q91Y17 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha2Q91Y17 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdha2Q91Y17 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha2Q91Y17 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha2Q91Y17 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdha2Q91Y17 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha2Q91Y17 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.7■□□□□ 0.58
Pcdha2Q91Y17 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdha2Q91Y17 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha2Q91Y17 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha2Q91Y17 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdha2Q91Y17 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha2Q91Y17 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdha2Q91Y17 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms