Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Gm12441-201ENSMUST00000121806 588 ntBASIC17.14■□□□□ 0.33
Pcdha8Q91Y12 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha8Q91Y12 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha8Q91Y12 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha8Q91Y12 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha8Q91Y12 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Pcdha8Q91Y12 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha8Q91Y12 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdha8Q91Y12 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha8Q91Y12 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha8Q91Y12 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha8Q91Y12 Dio3-201ENSMUST00000097228 1449 ntBASIC17.13■□□□□ 0.33
Pcdha8Q91Y12 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha8Q91Y12 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdha8Q91Y12 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.13■□□□□ 0.33
Pcdha8Q91Y12 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.13■□□□□ 0.33
Pcdha8Q91Y12 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha8Q91Y12 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha8Q91Y12 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha8Q91Y12 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha8Q91Y12 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdha8Q91Y12 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdha8Q91Y12 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pcdha8Q91Y12 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha8Q91Y12 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha8Q91Y12 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdha8Q91Y12 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha8Q91Y12 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdha8Q91Y12 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Pcdha8Q91Y12 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha8Q91Y12 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha8Q91Y12 Gm12896-201ENSMUST00000118430 226 ntBASIC17.12■□□□□ 0.33
Pcdha8Q91Y12 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdha8Q91Y12 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdha8Q91Y12 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdha8Q91Y12 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha8Q91Y12 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha8Q91Y12 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha8Q91Y12 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdha8Q91Y12 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha8Q91Y12 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha8Q91Y12 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha8Q91Y12 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha8Q91Y12 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha8Q91Y12 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdha8Q91Y12 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.11■□□□□ 0.33
Pcdha8Q91Y12 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha8Q91Y12 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha8Q91Y12 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.11■□□□□ 0.33
Pcdha8Q91Y12 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdha8Q91Y12 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdha8Q91Y12 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha8Q91Y12 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha8Q91Y12 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.11■□□□□ 0.33
Pcdha8Q91Y12 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha8Q91Y12 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha8Q91Y12 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Pcdha8Q91Y12 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdha8Q91Y12 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha8Q91Y12 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha8Q91Y12 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdha8Q91Y12 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.1■□□□□ 0.33
Pcdha8Q91Y12 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha8Q91Y12 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.1■□□□□ 0.33
Pcdha8Q91Y12 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdha8Q91Y12 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha8Q91Y12 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha8Q91Y12 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha8Q91Y12 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha8Q91Y12 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha8Q91Y12 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha8Q91Y12 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha8Q91Y12 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha8Q91Y12 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha8Q91Y12 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdha8Q91Y12 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.08■□□□□ 0.32
Pcdha8Q91Y12 Gm20049-201ENSMUST00000219950 730 ntBASIC17.08■□□□□ 0.32
Pcdha8Q91Y12 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha8Q91Y12 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pcdha8Q91Y12 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha8Q91Y12 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms