Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb5Q91XZ5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.76■□□□□ 0.91
Pcdhb5Q91XZ5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb5Q91XZ5 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcdhb5Q91XZ5 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb5Q91XZ5 Gm37025-201ENSMUST00000195159 829 ntBASIC20.76■□□□□ 0.91
Pcdhb5Q91XZ5 Gm7370-201ENSMUST00000219471 767 ntBASIC20.76■□□□□ 0.91
Pcdhb5Q91XZ5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb5Q91XZ5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Pcdhb5Q91XZ5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Pcdhb5Q91XZ5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb5Q91XZ5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb5Q91XZ5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb5Q91XZ5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Pcdhb5Q91XZ5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb5Q91XZ5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb5Q91XZ5 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pcdhb5Q91XZ5 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb5Q91XZ5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb5Q91XZ5 Gm25016-201ENSMUST00000158399 131 ntBASIC20.74■□□□□ 0.91
Pcdhb5Q91XZ5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb5Q91XZ5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.74■□□□□ 0.91
Pcdhb5Q91XZ5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb5Q91XZ5 Gm9731-201ENSMUST00000209480 747 ntBASIC20.74■□□□□ 0.91
Pcdhb5Q91XZ5 Fst-202ENSMUST00000223640 2612 ntBASIC20.74■□□□□ 0.91
Pcdhb5Q91XZ5 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pcdhb5Q91XZ5 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pcdhb5Q91XZ5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb5Q91XZ5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb5Q91XZ5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb5Q91XZ5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.73■□□□□ 0.91
Pcdhb5Q91XZ5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb5Q91XZ5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb5Q91XZ5 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb5Q91XZ5 Il3ra-202ENSMUST00000223589 738 ntBASIC20.73■□□□□ 0.91
Pcdhb5Q91XZ5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb5Q91XZ5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb5Q91XZ5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb5Q91XZ5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Pcdhb5Q91XZ5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb5Q91XZ5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb5Q91XZ5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb5Q91XZ5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhb5Q91XZ5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhb5Q91XZ5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.73■□□□□ 0.91
Pcdhb5Q91XZ5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb5Q91XZ5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb5Q91XZ5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Pcdhb5Q91XZ5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb5Q91XZ5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb5Q91XZ5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.72■□□□□ 0.91
Pcdhb5Q91XZ5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb5Q91XZ5 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb5Q91XZ5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Pcdhb5Q91XZ5 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.72■□□□□ 0.91
Pcdhb5Q91XZ5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb5Q91XZ5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb5Q91XZ5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb5Q91XZ5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb5Q91XZ5 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb5Q91XZ5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Pcdhb5Q91XZ5 Gm27389-201ENSMUST00000183622 195 ntBASIC20.71■□□□□ 0.91
Pcdhb5Q91XZ5 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.71■□□□□ 0.91
Pcdhb5Q91XZ5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb5Q91XZ5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb5Q91XZ5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb5Q91XZ5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Pcdhb5Q91XZ5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb5Q91XZ5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb5Q91XZ5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Pcdhb5Q91XZ5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Pcdhb5Q91XZ5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb5Q91XZ5 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb5Q91XZ5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb5Q91XZ5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb5Q91XZ5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb5Q91XZ5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb5Q91XZ5 Gm21559-201ENSMUST00000220638 855 ntBASIC20.7■□□□□ 0.9
Pcdhb5Q91XZ5 Gm8587-201ENSMUST00000076538 843 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms