Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trex1Q91XB0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trex1Q91XB0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.19■□□□□ 0.82
Trex1Q91XB0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trex1Q91XB0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trex1Q91XB0 Gm37025-201ENSMUST00000195159 829 ntBASIC20.19■□□□□ 0.82
Trex1Q91XB0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trex1Q91XB0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trex1Q91XB0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trex1Q91XB0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trex1Q91XB0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trex1Q91XB0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trex1Q91XB0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trex1Q91XB0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trex1Q91XB0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trex1Q91XB0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trex1Q91XB0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trex1Q91XB0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trex1Q91XB0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trex1Q91XB0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.18■□□□□ 0.82
Trex1Q91XB0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trex1Q91XB0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.18■□□□□ 0.82
Trex1Q91XB0 Il3ra-202ENSMUST00000223589 738 ntBASIC20.18■□□□□ 0.82
Trex1Q91XB0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trex1Q91XB0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trex1Q91XB0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Trex1Q91XB0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trex1Q91XB0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trex1Q91XB0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trex1Q91XB0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trex1Q91XB0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Trex1Q91XB0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.17■□□□□ 0.82
Trex1Q91XB0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trex1Q91XB0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trex1Q91XB0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trex1Q91XB0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trex1Q91XB0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trex1Q91XB0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trex1Q91XB0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trex1Q91XB0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trex1Q91XB0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trex1Q91XB0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trex1Q91XB0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trex1Q91XB0 Idnk-204ENSMUST00000226010 1898 ntBASIC20.16■□□□□ 0.82
Trex1Q91XB0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Trex1Q91XB0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trex1Q91XB0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trex1Q91XB0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trex1Q91XB0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trex1Q91XB0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trex1Q91XB0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trex1Q91XB0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trex1Q91XB0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trex1Q91XB0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Trex1Q91XB0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
Trex1Q91XB0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Trex1Q91XB0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Trex1Q91XB0 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.15■□□□□ 0.82
Trex1Q91XB0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Trex1Q91XB0 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.15■□□□□ 0.82
Trex1Q91XB0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trex1Q91XB0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trex1Q91XB0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
Trex1Q91XB0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.14■□□□□ 0.81
Trex1Q91XB0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trex1Q91XB0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
Trex1Q91XB0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trex1Q91XB0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trex1Q91XB0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trex1Q91XB0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.14■□□□□ 0.81
Trex1Q91XB0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trex1Q91XB0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trex1Q91XB0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.14■□□□□ 0.81
Trex1Q91XB0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trex1Q91XB0 Gm21559-201ENSMUST00000220638 855 ntBASIC20.14■□□□□ 0.81
Trex1Q91XB0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Trex1Q91XB0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trex1Q91XB0 Gm8587-201ENSMUST00000076538 843 ntBASIC20.14■□□□□ 0.81
Trex1Q91XB0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trex1Q91XB0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trex1Q91XB0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trex1Q91XB0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.14■□□□□ 0.81
Trex1Q91XB0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trex1Q91XB0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trex1Q91XB0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trex1Q91XB0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trex1Q91XB0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trex1Q91XB0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.13■□□□□ 0.81
Trex1Q91XB0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trex1Q91XB0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trex1Q91XB0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trex1Q91XB0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trex1Q91XB0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trex1Q91XB0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trex1Q91XB0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trex1Q91XB0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.13■□□□□ 0.81
Trex1Q91XB0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trex1Q91XB0 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.13■□□□□ 0.81
Trex1Q91XB0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trex1Q91XB0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms