Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
StrcQ8VIM6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
StrcQ8VIM6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
StrcQ8VIM6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
StrcQ8VIM6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.11■□□□□ 0.97
StrcQ8VIM6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
StrcQ8VIM6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
StrcQ8VIM6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
StrcQ8VIM6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC21.1■□□□□ 0.97
StrcQ8VIM6 Gm11452-201ENSMUST00000122376 690 ntBASIC21.1■□□□□ 0.97
StrcQ8VIM6 Gm2651-201ENSMUST00000203560 838 ntBASIC21.1■□□□□ 0.97
StrcQ8VIM6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
StrcQ8VIM6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
StrcQ8VIM6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
StrcQ8VIM6 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
StrcQ8VIM6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
StrcQ8VIM6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.1■□□□□ 0.97
StrcQ8VIM6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.1■□□□□ 0.97
StrcQ8VIM6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC21.09■□□□□ 0.97
StrcQ8VIM6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
StrcQ8VIM6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
StrcQ8VIM6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
StrcQ8VIM6 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC21.09■□□□□ 0.97
StrcQ8VIM6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
StrcQ8VIM6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
StrcQ8VIM6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
StrcQ8VIM6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC21.09■□□□□ 0.97
StrcQ8VIM6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
StrcQ8VIM6 BC021767-201ENSMUST00000126387 1716 ntBASIC21.09■□□□□ 0.97
StrcQ8VIM6 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
StrcQ8VIM6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC21.08■□□□□ 0.97
StrcQ8VIM6 Mir8112-201ENSMUST00000184382 131 ntBASIC21.08■□□□□ 0.97
StrcQ8VIM6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
StrcQ8VIM6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
StrcQ8VIM6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
StrcQ8VIM6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.08■□□□□ 0.97
StrcQ8VIM6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
StrcQ8VIM6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
StrcQ8VIM6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC21.08■□□□□ 0.96
StrcQ8VIM6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
StrcQ8VIM6 Gm43073-201ENSMUST00000198200 1189 ntBASIC21.08■□□□□ 0.96
StrcQ8VIM6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
StrcQ8VIM6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
StrcQ8VIM6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
StrcQ8VIM6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.08■□□□□ 0.96
StrcQ8VIM6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
StrcQ8VIM6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
StrcQ8VIM6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
StrcQ8VIM6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
StrcQ8VIM6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
StrcQ8VIM6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
StrcQ8VIM6 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
StrcQ8VIM6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC21.07■□□□□ 0.96
StrcQ8VIM6 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
StrcQ8VIM6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
StrcQ8VIM6 AC122351.1-201ENSMUST00000220467 126 ntBASIC21.07■□□□□ 0.96
StrcQ8VIM6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
StrcQ8VIM6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
StrcQ8VIM6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
StrcQ8VIM6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
StrcQ8VIM6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
StrcQ8VIM6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
StrcQ8VIM6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.07■□□□□ 0.96
StrcQ8VIM6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
StrcQ8VIM6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
StrcQ8VIM6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
StrcQ8VIM6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
StrcQ8VIM6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.06■□□□□ 0.96
StrcQ8VIM6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
StrcQ8VIM6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
StrcQ8VIM6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
StrcQ8VIM6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
StrcQ8VIM6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
StrcQ8VIM6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
StrcQ8VIM6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
StrcQ8VIM6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
StrcQ8VIM6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
StrcQ8VIM6 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.05■□□□□ 0.96
StrcQ8VIM6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC21.05■□□□□ 0.96
StrcQ8VIM6 Gm44357-201ENSMUST00000195897 142 ntBASIC21.05■□□□□ 0.96
StrcQ8VIM6 Gm19658-201ENSMUST00000196231 138 ntBASIC21.05■□□□□ 0.96
StrcQ8VIM6 Gm44367-201ENSMUST00000196836 138 ntBASIC21.05■□□□□ 0.96
StrcQ8VIM6 Gm44350-201ENSMUST00000197197 138 ntBASIC21.05■□□□□ 0.96
StrcQ8VIM6 Gm44390-201ENSMUST00000197533 144 ntBASIC21.05■□□□□ 0.96
StrcQ8VIM6 Gm44313-201ENSMUST00000198018 138 ntBASIC21.05■□□□□ 0.96
StrcQ8VIM6 Gm44486-201ENSMUST00000198508 138 ntBASIC21.05■□□□□ 0.96
StrcQ8VIM6 Gm44454-201ENSMUST00000198541 138 ntBASIC21.05■□□□□ 0.96
StrcQ8VIM6 Gm44314-201ENSMUST00000199263 138 ntBASIC21.05■□□□□ 0.96
StrcQ8VIM6 Gm44394-201ENSMUST00000199558 138 ntBASIC21.05■□□□□ 0.96
StrcQ8VIM6 Gm44484-201ENSMUST00000199873 138 ntBASIC21.05■□□□□ 0.96
StrcQ8VIM6 Gm44466-201ENSMUST00000200264 138 ntBASIC21.05■□□□□ 0.96
StrcQ8VIM6 Gm44359-201ENSMUST00000200671 138 ntBASIC21.05■□□□□ 0.96
StrcQ8VIM6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC21.05■□□□□ 0.96
StrcQ8VIM6 AC161829.1-201ENSMUST00000220298 281 ntBASIC21.05■□□□□ 0.96
StrcQ8VIM6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
StrcQ8VIM6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
StrcQ8VIM6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
StrcQ8VIM6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
StrcQ8VIM6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
StrcQ8VIM6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms