Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa1Q8VEE4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.73■□□□□ 0.43
Rpa1Q8VEE4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa1Q8VEE4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa1Q8VEE4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.73■□□□□ 0.43
Rpa1Q8VEE4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.73■□□□□ 0.43
Rpa1Q8VEE4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rpa1Q8VEE4 Dancr-204ENSMUST00000132389 2347 ntBASIC17.73■□□□□ 0.43
Rpa1Q8VEE4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa1Q8VEE4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.73■□□□□ 0.43
Rpa1Q8VEE4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.73■□□□□ 0.43
Rpa1Q8VEE4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa1Q8VEE4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa1Q8VEE4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rpa1Q8VEE4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.73■□□□□ 0.43
Rpa1Q8VEE4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rpa1Q8VEE4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rpa1Q8VEE4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpa1Q8VEE4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpa1Q8VEE4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpa1Q8VEE4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpa1Q8VEE4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
Rpa1Q8VEE4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpa1Q8VEE4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpa1Q8VEE4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpa1Q8VEE4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpa1Q8VEE4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.72■□□□□ 0.43
Rpa1Q8VEE4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Gm26833-201ENSMUST00000180899 440 ntBASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpa1Q8VEE4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Rpa1Q8VEE4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpa1Q8VEE4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpa1Q8VEE4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpa1Q8VEE4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpa1Q8VEE4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rpa1Q8VEE4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpa1Q8VEE4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpa1Q8VEE4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpa1Q8VEE4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpa1Q8VEE4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpa1Q8VEE4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpa1Q8VEE4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.7■□□□□ 0.42
Rpa1Q8VEE4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rpa1Q8VEE4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpa1Q8VEE4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rpa1Q8VEE4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpa1Q8VEE4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpa1Q8VEE4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpa1Q8VEE4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpa1Q8VEE4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpa1Q8VEE4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpa1Q8VEE4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpa1Q8VEE4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.69■□□□□ 0.42
Rpa1Q8VEE4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rpa1Q8VEE4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.69■□□□□ 0.42
Rpa1Q8VEE4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rpa1Q8VEE4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rpa1Q8VEE4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rpa1Q8VEE4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rpa1Q8VEE4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpa1Q8VEE4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Gm22325-201ENSMUST00000158904 308 ntBASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Gm43017-201ENSMUST00000198296 752 ntBASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpa1Q8VEE4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms