Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp33Q8R5K2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Usp33Q8R5K2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp33Q8R5K2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp33Q8R5K2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp33Q8R5K2 Gm7461-201ENSMUST00000058918 827 ntBASIC20.2■□□□□ 0.82
Usp33Q8R5K2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Usp33Q8R5K2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Usp33Q8R5K2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp33Q8R5K2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp33Q8R5K2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp33Q8R5K2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Usp33Q8R5K2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp33Q8R5K2 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.2■□□□□ 0.82
Usp33Q8R5K2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp33Q8R5K2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp33Q8R5K2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp33Q8R5K2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp33Q8R5K2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp33Q8R5K2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp33Q8R5K2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp33Q8R5K2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Usp33Q8R5K2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.19■□□□□ 0.82
Usp33Q8R5K2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.19■□□□□ 0.82
Usp33Q8R5K2 Gm5587-201ENSMUST00000206270 674 ntBASIC20.19■□□□□ 0.82
Usp33Q8R5K2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp33Q8R5K2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp33Q8R5K2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp33Q8R5K2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Usp33Q8R5K2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Usp33Q8R5K2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Usp33Q8R5K2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Usp33Q8R5K2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp33Q8R5K2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp33Q8R5K2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp33Q8R5K2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp33Q8R5K2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.18■□□□□ 0.82
Usp33Q8R5K2 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.18■□□□□ 0.82
Usp33Q8R5K2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Usp33Q8R5K2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp33Q8R5K2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Usp33Q8R5K2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp33Q8R5K2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Gm13401-201ENSMUST00000117074 291 ntBASIC20.17■□□□□ 0.82
Usp33Q8R5K2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp33Q8R5K2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.16■□□□□ 0.82
Usp33Q8R5K2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp33Q8R5K2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp33Q8R5K2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp33Q8R5K2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp33Q8R5K2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp33Q8R5K2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp33Q8R5K2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp33Q8R5K2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp33Q8R5K2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp33Q8R5K2 Gm29518-201ENSMUST00000190858 372 ntBASIC20.16■□□□□ 0.82
Usp33Q8R5K2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp33Q8R5K2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Usp33Q8R5K2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp33Q8R5K2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.16■□□□□ 0.82
Usp33Q8R5K2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.16■□□□□ 0.82
Usp33Q8R5K2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.16■□□□□ 0.82
Usp33Q8R5K2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp33Q8R5K2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp33Q8R5K2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp33Q8R5K2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.15■□□□□ 0.82
Usp33Q8R5K2 Gm17807-201ENSMUST00000186869 298 ntBASIC20.15■□□□□ 0.82
Usp33Q8R5K2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp33Q8R5K2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp33Q8R5K2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp33Q8R5K2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp33Q8R5K2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp33Q8R5K2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp33Q8R5K2 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.15■□□□□ 0.82
Usp33Q8R5K2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp33Q8R5K2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp33Q8R5K2 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.15■□□□□ 0.82
Usp33Q8R5K2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp33Q8R5K2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp33Q8R5K2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms