Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Sh3kbp1Q8R550 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh3kbp1Q8R550 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3kbp1Q8R550 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3kbp1Q8R550 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3kbp1Q8R550 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.11■□□□□ 0.49
Sh3kbp1Q8R550 Gm10138-203ENSMUST00000206952 366 ntBASIC18.11■□□□□ 0.49
Sh3kbp1Q8R550 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.11■□□□□ 0.49
Sh3kbp1Q8R550 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3kbp1Q8R550 Gm5417-201ENSMUST00000079706 384 ntBASIC18.11■□□□□ 0.49
Sh3kbp1Q8R550 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Sh3kbp1Q8R550 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3kbp1Q8R550 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3kbp1Q8R550 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.11■□□□□ 0.49
Sh3kbp1Q8R550 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
Sh3kbp1Q8R550 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3kbp1Q8R550 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Sh3kbp1Q8R550 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.11■□□□□ 0.49
Sh3kbp1Q8R550 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh3kbp1Q8R550 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3kbp1Q8R550 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3kbp1Q8R550 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3kbp1Q8R550 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3kbp1Q8R550 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.1■□□□□ 0.49
Sh3kbp1Q8R550 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3kbp1Q8R550 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Sh3kbp1Q8R550 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3kbp1Q8R550 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3kbp1Q8R550 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3kbp1Q8R550 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3kbp1Q8R550 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.1■□□□□ 0.49
Sh3kbp1Q8R550 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.1■□□□□ 0.49
Sh3kbp1Q8R550 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3kbp1Q8R550 Gm9987-201ENSMUST00000069768 567 ntBASIC18.1■□□□□ 0.49
Sh3kbp1Q8R550 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3kbp1Q8R550 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3kbp1Q8R550 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3kbp1Q8R550 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sh3kbp1Q8R550 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Gm42545-201ENSMUST00000202755 922 ntBASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sh3kbp1Q8R550 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.08■□□□□ 0.49
Sh3kbp1Q8R550 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sh3kbp1Q8R550 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.08■□□□□ 0.49
Sh3kbp1Q8R550 Gm15375-201ENSMUST00000119510 849 ntBASIC18.08■□□□□ 0.48
Sh3kbp1Q8R550 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.08■□□□□ 0.48
Sh3kbp1Q8R550 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Sh3kbp1Q8R550 Gm18025-201ENSMUST00000221733 862 ntBASIC18.08■□□□□ 0.48
Sh3kbp1Q8R550 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms