Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.65■□□□□ 0.74
Atp2a1Q8R429 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Atp2a1Q8R429 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Atp2a1Q8R429 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Atp2a1Q8R429 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.65■□□□□ 0.74
Atp2a1Q8R429 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.65■□□□□ 0.74
Atp2a1Q8R429 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Atp2a1Q8R429 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.65■□□□□ 0.74
Atp2a1Q8R429 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atp2a1Q8R429 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atp2a1Q8R429 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Atp2a1Q8R429 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atp2a1Q8R429 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Atp2a1Q8R429 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atp2a1Q8R429 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Atp2a1Q8R429 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Atp2a1Q8R429 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Atp2a1Q8R429 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Atp2a1Q8R429 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp2a1Q8R429 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.64■□□□□ 0.73
Atp2a1Q8R429 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Atp2a1Q8R429 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp2a1Q8R429 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.64■□□□□ 0.73
Atp2a1Q8R429 Gm27463-201ENSMUST00000183569 57 ntBASIC19.64■□□□□ 0.73
Atp2a1Q8R429 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp2a1Q8R429 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp2a1Q8R429 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp2a1Q8R429 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp2a1Q8R429 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp2a1Q8R429 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Atp2a1Q8R429 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp2a1Q8R429 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp2a1Q8R429 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp2a1Q8R429 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp2a1Q8R429 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp2a1Q8R429 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp2a1Q8R429 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atp2a1Q8R429 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atp2a1Q8R429 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.63■□□□□ 0.73
Atp2a1Q8R429 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.63■□□□□ 0.73
Atp2a1Q8R429 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atp2a1Q8R429 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.63■□□□□ 0.73
Atp2a1Q8R429 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Atp2a1Q8R429 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp2a1Q8R429 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Atp2a1Q8R429 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp2a1Q8R429 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.62■□□□□ 0.73
Atp2a1Q8R429 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp2a1Q8R429 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp2a1Q8R429 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.62■□□□□ 0.73
Atp2a1Q8R429 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Atp2a1Q8R429 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.62■□□□□ 0.73
Atp2a1Q8R429 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.62■□□□□ 0.73
Atp2a1Q8R429 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.62■□□□□ 0.73
Atp2a1Q8R429 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp2a1Q8R429 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp2a1Q8R429 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Atp2a1Q8R429 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp2a1Q8R429 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Atp2a1Q8R429 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.6■□□□□ 0.73
Atp2a1Q8R429 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atp2a1Q8R429 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Atp2a1Q8R429 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atp2a1Q8R429 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atp2a1Q8R429 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.6■□□□□ 0.73
Atp2a1Q8R429 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atp2a1Q8R429 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Atp2a1Q8R429 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Atp2a1Q8R429 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atp2a1Q8R429 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Atp2a1Q8R429 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.6■□□□□ 0.73
Atp2a1Q8R429 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
Atp2a1Q8R429 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atp2a1Q8R429 Grk6-206ENSMUST00000224995 2971 ntBASIC19.59■□□□□ 0.73
Atp2a1Q8R429 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atp2a1Q8R429 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atp2a1Q8R429 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.59■□□□□ 0.73
Atp2a1Q8R429 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Atp2a1Q8R429 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Atp2a1Q8R429 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms