Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vopp1Q8R1C3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.75■□□□□ 0.59
Vopp1Q8R1C3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vopp1Q8R1C3 Gm13474-201ENSMUST00000122466 815 ntBASIC18.75■□□□□ 0.59
Vopp1Q8R1C3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vopp1Q8R1C3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.75■□□□□ 0.59
Vopp1Q8R1C3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.75■□□□□ 0.59
Vopp1Q8R1C3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.75■□□□□ 0.59
Vopp1Q8R1C3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vopp1Q8R1C3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vopp1Q8R1C3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vopp1Q8R1C3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vopp1Q8R1C3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vopp1Q8R1C3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vopp1Q8R1C3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vopp1Q8R1C3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vopp1Q8R1C3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vopp1Q8R1C3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.74■□□□□ 0.59
Vopp1Q8R1C3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.74■□□□□ 0.59
Vopp1Q8R1C3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vopp1Q8R1C3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vopp1Q8R1C3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vopp1Q8R1C3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vopp1Q8R1C3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vopp1Q8R1C3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Vopp1Q8R1C3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vopp1Q8R1C3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vopp1Q8R1C3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vopp1Q8R1C3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vopp1Q8R1C3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Vopp1Q8R1C3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Vopp1Q8R1C3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Vopp1Q8R1C3 Gm33142-201ENSMUST00000193913 867 ntBASIC18.73■□□□□ 0.59
Vopp1Q8R1C3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vopp1Q8R1C3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.73■□□□□ 0.59
Vopp1Q8R1C3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vopp1Q8R1C3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.73■□□□□ 0.59
Vopp1Q8R1C3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vopp1Q8R1C3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vopp1Q8R1C3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Vopp1Q8R1C3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vopp1Q8R1C3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vopp1Q8R1C3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vopp1Q8R1C3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.72■□□□□ 0.59
Vopp1Q8R1C3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.72■□□□□ 0.59
Vopp1Q8R1C3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vopp1Q8R1C3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vopp1Q8R1C3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vopp1Q8R1C3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.72■□□□□ 0.59
Vopp1Q8R1C3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.72■□□□□ 0.59
Vopp1Q8R1C3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vopp1Q8R1C3 Gm7213-201ENSMUST00000215977 950 ntBASIC18.72■□□□□ 0.59
Vopp1Q8R1C3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vopp1Q8R1C3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vopp1Q8R1C3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vopp1Q8R1C3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.72■□□□□ 0.59
Vopp1Q8R1C3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vopp1Q8R1C3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vopp1Q8R1C3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vopp1Q8R1C3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Vopp1Q8R1C3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vopp1Q8R1C3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.71■□□□□ 0.59
Vopp1Q8R1C3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.71■□□□□ 0.59
Vopp1Q8R1C3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.71■□□□□ 0.59
Vopp1Q8R1C3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Vopp1Q8R1C3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vopp1Q8R1C3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vopp1Q8R1C3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vopp1Q8R1C3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vopp1Q8R1C3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Vopp1Q8R1C3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vopp1Q8R1C3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Vopp1Q8R1C3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vopp1Q8R1C3 Gm7367-201ENSMUST00000057611 492 ntBASIC18.7■□□□□ 0.58
Vopp1Q8R1C3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vopp1Q8R1C3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vopp1Q8R1C3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Vopp1Q8R1C3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vopp1Q8R1C3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Vopp1Q8R1C3 Actl10-202ENSMUST00000226583 1501 ntBASIC18.69■□□□□ 0.58
Vopp1Q8R1C3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vopp1Q8R1C3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vopp1Q8R1C3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vopp1Q8R1C3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Vopp1Q8R1C3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vopp1Q8R1C3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
Vopp1Q8R1C3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vopp1Q8R1C3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vopp1Q8R1C3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vopp1Q8R1C3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vopp1Q8R1C3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vopp1Q8R1C3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.69■□□□□ 0.58
Vopp1Q8R1C3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vopp1Q8R1C3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vopp1Q8R1C3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vopp1Q8R1C3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vopp1Q8R1C3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.68■□□□□ 0.58
Vopp1Q8R1C3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vopp1Q8R1C3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Vopp1Q8R1C3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms