Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Treml1Q8K558 Gm29791-202ENSMUST00000207888 369 ntBASIC17.32■□□□□ 0.36
Treml1Q8K558 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Treml1Q8K558 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Treml1Q8K558 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Treml1Q8K558 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.32■□□□□ 0.36
Treml1Q8K558 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Treml1Q8K558 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Treml1Q8K558 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Treml1Q8K558 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.32■□□□□ 0.36
Treml1Q8K558 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Treml1Q8K558 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Treml1Q8K558 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Treml1Q8K558 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Treml1Q8K558 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.31■□□□□ 0.36
Treml1Q8K558 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Treml1Q8K558 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Treml1Q8K558 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Treml1Q8K558 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Treml1Q8K558 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Treml1Q8K558 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Treml1Q8K558 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.31■□□□□ 0.36
Treml1Q8K558 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.31■□□□□ 0.36
Treml1Q8K558 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.31■□□□□ 0.36
Treml1Q8K558 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Treml1Q8K558 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Treml1Q8K558 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Treml1Q8K558 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Treml1Q8K558 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Treml1Q8K558 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Treml1Q8K558 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Treml1Q8K558 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.3■□□□□ 0.36
Treml1Q8K558 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Treml1Q8K558 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml1Q8K558 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml1Q8K558 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Treml1Q8K558 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml1Q8K558 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml1Q8K558 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml1Q8K558 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml1Q8K558 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.3■□□□□ 0.36
Treml1Q8K558 Mir1199-201ENSMUST00000117015 119 ntBASIC17.3■□□□□ 0.36
Treml1Q8K558 Gm12382-201ENSMUST00000122005 922 ntBASIC17.3■□□□□ 0.36
Treml1Q8K558 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml1Q8K558 Gm6576-201ENSMUST00000169678 883 ntBASIC17.3■□□□□ 0.36
Treml1Q8K558 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.3■□□□□ 0.36
Treml1Q8K558 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml1Q8K558 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml1Q8K558 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Treml1Q8K558 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml1Q8K558 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml1Q8K558 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml1Q8K558 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Treml1Q8K558 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml1Q8K558 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Treml1Q8K558 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Treml1Q8K558 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Treml1Q8K558 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Treml1Q8K558 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Treml1Q8K558 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Treml1Q8K558 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Treml1Q8K558 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Treml1Q8K558 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Treml1Q8K558 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Treml1Q8K558 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Treml1Q8K558 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Treml1Q8K558 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Treml1Q8K558 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Treml1Q8K558 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Treml1Q8K558 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Treml1Q8K558 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Treml1Q8K558 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Treml1Q8K558 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Treml1Q8K558 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Treml1Q8K558 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Treml1Q8K558 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Treml1Q8K558 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml1Q8K558 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml1Q8K558 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Treml1Q8K558 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Treml1Q8K558 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml1Q8K558 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml1Q8K558 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.28■□□□□ 0.36
Treml1Q8K558 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Treml1Q8K558 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.28■□□□□ 0.36
Treml1Q8K558 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml1Q8K558 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml1Q8K558 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml1Q8K558 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml1Q8K558 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml1Q8K558 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Treml1Q8K558 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml1Q8K558 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml1Q8K558 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml1Q8K558 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.27■□□□□ 0.36
Treml1Q8K558 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Treml1Q8K558 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Treml1Q8K558 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Treml1Q8K558 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Treml1Q8K558 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms