Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm8969-201ENSMUST00000199694 526 ntBASIC20.73■□□□□ 0.91
Nup88Q8CEC0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup88Q8CEC0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Nup88Q8CEC0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nup88Q8CEC0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup88Q8CEC0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup88Q8CEC0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nup88Q8CEC0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nup88Q8CEC0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nup88Q8CEC0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup88Q8CEC0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nup88Q8CEC0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup88Q8CEC0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.72■□□□□ 0.91
Nup88Q8CEC0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Nup88Q8CEC0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup88Q8CEC0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.72■□□□□ 0.91
Nup88Q8CEC0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nup88Q8CEC0 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.72■□□□□ 0.91
Nup88Q8CEC0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup88Q8CEC0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup88Q8CEC0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup88Q8CEC0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nup88Q8CEC0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nup88Q8CEC0 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.72■□□□□ 0.91
Nup88Q8CEC0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nup88Q8CEC0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nup88Q8CEC0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Nup88Q8CEC0 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.71■□□□□ 0.91
Nup88Q8CEC0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup88Q8CEC0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nup88Q8CEC0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Nup88Q8CEC0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Nup88Q8CEC0 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.71■□□□□ 0.91
Nup88Q8CEC0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup88Q8CEC0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup88Q8CEC0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup88Q8CEC0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup88Q8CEC0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup88Q8CEC0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nup88Q8CEC0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup88Q8CEC0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nup88Q8CEC0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup88Q8CEC0 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.7■□□□□ 0.9
Nup88Q8CEC0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup88Q8CEC0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup88Q8CEC0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup88Q8CEC0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup88Q8CEC0 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.7■□□□□ 0.9
Nup88Q8CEC0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup88Q8CEC0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup88Q8CEC0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nup88Q8CEC0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nup88Q8CEC0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 Gm15378-201ENSMUST00000121894 207 ntBASIC20.69■□□□□ 0.9
Nup88Q8CEC0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.69■□□□□ 0.9
Nup88Q8CEC0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.69■□□□□ 0.9
Nup88Q8CEC0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nup88Q8CEC0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup88Q8CEC0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.68■□□□□ 0.9
Nup88Q8CEC0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup88Q8CEC0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup88Q8CEC0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup88Q8CEC0 Gm715-201ENSMUST00000117865 831 ntBASIC20.68■□□□□ 0.9
Nup88Q8CEC0 Gm13158-201ENSMUST00000122007 736 ntBASIC20.68■□□□□ 0.9
Nup88Q8CEC0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nup88Q8CEC0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.68■□□□□ 0.9
Nup88Q8CEC0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Nup88Q8CEC0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.68■□□□□ 0.9
Nup88Q8CEC0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup88Q8CEC0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup88Q8CEC0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup88Q8CEC0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nup88Q8CEC0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Nup88Q8CEC0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.68■□□□□ 0.9
Nup88Q8CEC0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nup88Q8CEC0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup88Q8CEC0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup88Q8CEC0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Nup88Q8CEC0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup88Q8CEC0 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.67■□□□□ 0.9
Nup88Q8CEC0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nup88Q8CEC0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms