Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SynpoQ8CC35 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SynpoQ8CC35 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SynpoQ8CC35 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17■□□□□ 0.31
SynpoQ8CC35 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SynpoQ8CC35 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.99■□□□□ 0.31
SynpoQ8CC35 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SynpoQ8CC35 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SynpoQ8CC35 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SynpoQ8CC35 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SynpoQ8CC35 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SynpoQ8CC35 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.99■□□□□ 0.31
SynpoQ8CC35 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SynpoQ8CC35 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SynpoQ8CC35 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SynpoQ8CC35 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SynpoQ8CC35 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SynpoQ8CC35 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SynpoQ8CC35 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SynpoQ8CC35 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SynpoQ8CC35 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SynpoQ8CC35 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SynpoQ8CC35 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SynpoQ8CC35 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SynpoQ8CC35 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SynpoQ8CC35 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SynpoQ8CC35 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.98■□□□□ 0.31
SynpoQ8CC35 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.98■□□□□ 0.31
SynpoQ8CC35 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SynpoQ8CC35 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SynpoQ8CC35 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SynpoQ8CC35 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SynpoQ8CC35 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SynpoQ8CC35 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SynpoQ8CC35 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SynpoQ8CC35 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
SynpoQ8CC35 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SynpoQ8CC35 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.97■□□□□ 0.31
SynpoQ8CC35 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SynpoQ8CC35 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.97■□□□□ 0.31
SynpoQ8CC35 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SynpoQ8CC35 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SynpoQ8CC35 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SynpoQ8CC35 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SynpoQ8CC35 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.97■□□□□ 0.31
SynpoQ8CC35 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.97■□□□□ 0.31
SynpoQ8CC35 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SynpoQ8CC35 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SynpoQ8CC35 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SynpoQ8CC35 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SynpoQ8CC35 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SynpoQ8CC35 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SynpoQ8CC35 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SynpoQ8CC35 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SynpoQ8CC35 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SynpoQ8CC35 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SynpoQ8CC35 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.96■□□□□ 0.31
SynpoQ8CC35 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SynpoQ8CC35 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SynpoQ8CC35 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SynpoQ8CC35 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.96■□□□□ 0.31
SynpoQ8CC35 Gm10698-201ENSMUST00000182663 604 ntBASIC16.96■□□□□ 0.31
SynpoQ8CC35 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.96■□□□□ 0.31
SynpoQ8CC35 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.96■□□□□ 0.31
SynpoQ8CC35 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.96■□□□□ 0.31
SynpoQ8CC35 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.96■□□□□ 0.31
SynpoQ8CC35 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SynpoQ8CC35 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.96■□□□□ 0.31
SynpoQ8CC35 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SynpoQ8CC35 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SynpoQ8CC35 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SynpoQ8CC35 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SynpoQ8CC35 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
SynpoQ8CC35 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SynpoQ8CC35 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SynpoQ8CC35 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SynpoQ8CC35 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SynpoQ8CC35 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SynpoQ8CC35 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.95■□□□□ 0.3
SynpoQ8CC35 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SynpoQ8CC35 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SynpoQ8CC35 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SynpoQ8CC35 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SynpoQ8CC35 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SynpoQ8CC35 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SynpoQ8CC35 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SynpoQ8CC35 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SynpoQ8CC35 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SynpoQ8CC35 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SynpoQ8CC35 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SynpoQ8CC35 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SynpoQ8CC35 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SynpoQ8CC35 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SynpoQ8CC35 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SynpoQ8CC35 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SynpoQ8CC35 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SynpoQ8CC35 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SynpoQ8CC35 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SynpoQ8CC35 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SynpoQ8CC35 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms