Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Gm7290-201ENSMUST00000104990 617 ntBASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Gm12918-201ENSMUST00000120234 636 ntBASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Gm15710-201ENSMUST00000121821 636 ntBASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Mir5133-201ENSMUST00000174955 77 ntBASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Gm5075-201ENSMUST00000196916 622 ntBASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rft1Q8C3B8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rft1Q8C3B8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rft1Q8C3B8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rft1Q8C3B8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.68■□□□□ 0.1
Rft1Q8C3B8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rft1Q8C3B8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.68■□□□□ 0.1
Rft1Q8C3B8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rft1Q8C3B8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rft1Q8C3B8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rft1Q8C3B8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rft1Q8C3B8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rft1Q8C3B8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rft1Q8C3B8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rft1Q8C3B8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rft1Q8C3B8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rft1Q8C3B8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rft1Q8C3B8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rft1Q8C3B8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rft1Q8C3B8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.68■□□□□ 0.1
Rft1Q8C3B8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rft1Q8C3B8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rft1Q8C3B8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rft1Q8C3B8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Rft1Q8C3B8 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.66■□□□□ 0.1
Rft1Q8C3B8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rft1Q8C3B8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rft1Q8C3B8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rft1Q8C3B8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rft1Q8C3B8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rft1Q8C3B8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rft1Q8C3B8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rft1Q8C3B8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rft1Q8C3B8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.66■□□□□ 0.1
Rft1Q8C3B8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rft1Q8C3B8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rft1Q8C3B8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rft1Q8C3B8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rft1Q8C3B8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rft1Q8C3B8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rft1Q8C3B8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rft1Q8C3B8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.66■□□□□ 0.1
Rft1Q8C3B8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rft1Q8C3B8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rft1Q8C3B8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rft1Q8C3B8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rft1Q8C3B8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rft1Q8C3B8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms