Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC21.63■■□□□ 1.05
Ptcd1Q8C2E4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ptcd1Q8C2E4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ptcd1Q8C2E4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptcd1Q8C2E4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptcd1Q8C2E4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptcd1Q8C2E4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptcd1Q8C2E4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.63■■□□□ 1.05
Ptcd1Q8C2E4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
Ptcd1Q8C2E4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ptcd1Q8C2E4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Gm7153-201ENSMUST00000117092 455 ntBASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Gm27389-201ENSMUST00000183622 195 ntBASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Gm44771-201ENSMUST00000206975 626 ntBASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Gm21559-201ENSMUST00000220638 855 ntBASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Gm8587-201ENSMUST00000076538 843 ntBASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ptcd1Q8C2E4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ptcd1Q8C2E4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptcd1Q8C2E4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptcd1Q8C2E4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptcd1Q8C2E4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ptcd1Q8C2E4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptcd1Q8C2E4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC21.61■■□□□ 1.05
Ptcd1Q8C2E4 Gm13474-201ENSMUST00000122466 815 ntBASIC21.61■■□□□ 1.05
Ptcd1Q8C2E4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptcd1Q8C2E4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Ptcd1Q8C2E4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
Ptcd1Q8C2E4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ptcd1Q8C2E4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ptcd1Q8C2E4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptcd1Q8C2E4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ptcd1Q8C2E4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptcd1Q8C2E4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptcd1Q8C2E4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Ptcd1Q8C2E4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ptcd1Q8C2E4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ptcd1Q8C2E4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ptcd1Q8C2E4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC21.6■■□□□ 1.05
Ptcd1Q8C2E4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.6■■□□□ 1.05
Ptcd1Q8C2E4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptcd1Q8C2E4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptcd1Q8C2E4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ptcd1Q8C2E4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptcd1Q8C2E4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ptcd1Q8C2E4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptcd1Q8C2E4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.59■■□□□ 1.05
Ptcd1Q8C2E4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptcd1Q8C2E4 Gm4974-201ENSMUST00000209974 875 ntBASIC21.59■■□□□ 1.05
Ptcd1Q8C2E4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptcd1Q8C2E4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptcd1Q8C2E4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptcd1Q8C2E4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ptcd1Q8C2E4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptcd1Q8C2E4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ptcd1Q8C2E4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.58■■□□□ 1.05
Ptcd1Q8C2E4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Ptcd1Q8C2E4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ptcd1Q8C2E4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC21.58■■□□□ 1.05
Ptcd1Q8C2E4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ptcd1Q8C2E4 Gm29518-201ENSMUST00000190858 372 ntBASIC21.58■■□□□ 1.05
Ptcd1Q8C2E4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ptcd1Q8C2E4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ptcd1Q8C2E4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ptcd1Q8C2E4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Ptcd1Q8C2E4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ptcd1Q8C2E4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ptcd1Q8C2E4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ptcd1Q8C2E4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptcd1Q8C2E4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptcd1Q8C2E4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Ptcd1Q8C2E4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ptcd1Q8C2E4 Gm9013-201ENSMUST00000132939 882 ntBASIC21.57■■□□□ 1.04
Ptcd1Q8C2E4 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptcd1Q8C2E4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptcd1Q8C2E4 Gm18669-201ENSMUST00000216049 778 ntBASIC21.57■■□□□ 1.04
Ptcd1Q8C2E4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptcd1Q8C2E4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ptcd1Q8C2E4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ptcd1Q8C2E4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.56■■□□□ 1.04
Ptcd1Q8C2E4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptcd1Q8C2E4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptcd1Q8C2E4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ptcd1Q8C2E4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms