Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Smim4Q8C1Q6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smim4Q8C1Q6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smim4Q8C1Q6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smim4Q8C1Q6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smim4Q8C1Q6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 Gm18284-201ENSMUST00000172604 624 ntBASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 Idnk-204ENSMUST00000226010 1898 ntBASIC14.74□□□□□ -0.05
Smim4Q8C1Q6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 Gm6211-202ENSMUST00000167849 925 ntBASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim4Q8C1Q6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim4Q8C1Q6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim4Q8C1Q6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim4Q8C1Q6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smim4Q8C1Q6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim4Q8C1Q6 Gm2399-201ENSMUST00000104944 225 ntBASIC14.72□□□□□ -0.05
Smim4Q8C1Q6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smim4Q8C1Q6 Gm7291-201ENSMUST00000199147 382 ntBASIC14.72□□□□□ -0.05
Smim4Q8C1Q6 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.72□□□□□ -0.05
Smim4Q8C1Q6 Gm42569-201ENSMUST00000200539 472 ntBASIC14.72□□□□□ -0.05
Smim4Q8C1Q6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim4Q8C1Q6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim4Q8C1Q6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Smim4Q8C1Q6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim4Q8C1Q6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim4Q8C1Q6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim4Q8C1Q6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.72□□□□□ -0.05
Smim4Q8C1Q6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smim4Q8C1Q6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim4Q8C1Q6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim4Q8C1Q6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim4Q8C1Q6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim4Q8C1Q6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim4Q8C1Q6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smim4Q8C1Q6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim4Q8C1Q6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim4Q8C1Q6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim4Q8C1Q6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Smim4Q8C1Q6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim4Q8C1Q6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim4Q8C1Q6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Smim4Q8C1Q6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim4Q8C1Q6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim4Q8C1Q6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Smim4Q8C1Q6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim4Q8C1Q6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms