Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Suds3Q8BR65 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Suds3Q8BR65 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Suds3Q8BR65 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Suds3Q8BR65 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Suds3Q8BR65 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Suds3Q8BR65 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Suds3Q8BR65 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Suds3Q8BR65 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Suds3Q8BR65 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Suds3Q8BR65 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Suds3Q8BR65 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Suds3Q8BR65 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Suds3Q8BR65 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Suds3Q8BR65 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Suds3Q8BR65 Gm20760-201ENSMUST00000179197 648 ntBASIC18.03■□□□□ 0.48
Suds3Q8BR65 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Suds3Q8BR65 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Suds3Q8BR65 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Suds3Q8BR65 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Suds3Q8BR65 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Suds3Q8BR65 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.03■□□□□ 0.48
Suds3Q8BR65 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Suds3Q8BR65 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Suds3Q8BR65 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Suds3Q8BR65 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Suds3Q8BR65 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Suds3Q8BR65 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.02■□□□□ 0.48
Suds3Q8BR65 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Suds3Q8BR65 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Suds3Q8BR65 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Suds3Q8BR65 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Suds3Q8BR65 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Suds3Q8BR65 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.02■□□□□ 0.48
Suds3Q8BR65 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Suds3Q8BR65 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Suds3Q8BR65 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Suds3Q8BR65 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.02■□□□□ 0.47
Suds3Q8BR65 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Suds3Q8BR65 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.01■□□□□ 0.47
Suds3Q8BR65 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Suds3Q8BR65 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Suds3Q8BR65 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Suds3Q8BR65 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Suds3Q8BR65 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Suds3Q8BR65 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.01■□□□□ 0.47
Suds3Q8BR65 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.01■□□□□ 0.47
Suds3Q8BR65 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Suds3Q8BR65 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.01■□□□□ 0.47
Suds3Q8BR65 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Suds3Q8BR65 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Suds3Q8BR65 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Suds3Q8BR65 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Suds3Q8BR65 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Suds3Q8BR65 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Suds3Q8BR65 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Suds3Q8BR65 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18■□□□□ 0.47
Suds3Q8BR65 Tgds-204ENSMUST00000228543 1594 ntBASIC18■□□□□ 0.47
Suds3Q8BR65 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Suds3Q8BR65 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Suds3Q8BR65 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Suds3Q8BR65 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Suds3Q8BR65 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18■□□□□ 0.47
Suds3Q8BR65 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Suds3Q8BR65 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18■□□□□ 0.47
Suds3Q8BR65 Gm13168-201ENSMUST00000121771 632 ntBASIC18■□□□□ 0.47
Suds3Q8BR65 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18■□□□□ 0.47
Suds3Q8BR65 Gm2559-201ENSMUST00000201323 363 ntBASIC18■□□□□ 0.47
Suds3Q8BR65 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18■□□□□ 0.47
Suds3Q8BR65 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Suds3Q8BR65 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Suds3Q8BR65 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18■□□□□ 0.47
Suds3Q8BR65 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Suds3Q8BR65 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Suds3Q8BR65 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Suds3Q8BR65 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Suds3Q8BR65 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Suds3Q8BR65 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Suds3Q8BR65 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Suds3Q8BR65 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Suds3Q8BR65 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Suds3Q8BR65 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Suds3Q8BR65 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Suds3Q8BR65 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Suds3Q8BR65 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.99■□□□□ 0.47
Suds3Q8BR65 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Suds3Q8BR65 Gm22240-201ENSMUST00000175225 82 ntBASIC17.99■□□□□ 0.47
Suds3Q8BR65 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.99■□□□□ 0.47
Suds3Q8BR65 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Suds3Q8BR65 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Suds3Q8BR65 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Suds3Q8BR65 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.99■□□□□ 0.47
Suds3Q8BR65 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Suds3Q8BR65 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Suds3Q8BR65 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Suds3Q8BR65 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.99■□□□□ 0.47
Suds3Q8BR65 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Suds3Q8BR65 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Suds3Q8BR65 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Suds3Q8BR65 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms