Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ckap4Q8BMK4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ckap4Q8BMK4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ckap4Q8BMK4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ckap4Q8BMK4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ckap4Q8BMK4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ckap4Q8BMK4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ckap4Q8BMK4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ckap4Q8BMK4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ckap4Q8BMK4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.66■□□□□ 0.26
Ckap4Q8BMK4 Gm7291-201ENSMUST00000199147 382 ntBASIC16.66■□□□□ 0.26
Ckap4Q8BMK4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Ckap4Q8BMK4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.66■□□□□ 0.26
Ckap4Q8BMK4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.66■□□□□ 0.26
Ckap4Q8BMK4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ckap4Q8BMK4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ckap4Q8BMK4 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.66■□□□□ 0.26
Ckap4Q8BMK4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ckap4Q8BMK4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ckap4Q8BMK4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ckap4Q8BMK4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ckap4Q8BMK4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ckap4Q8BMK4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ckap4Q8BMK4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.64■□□□□ 0.25
Ckap4Q8BMK4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ckap4Q8BMK4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ckap4Q8BMK4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ckap4Q8BMK4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.63■□□□□ 0.25
Ckap4Q8BMK4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ckap4Q8BMK4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ckap4Q8BMK4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ckap4Q8BMK4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ckap4Q8BMK4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ckap4Q8BMK4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ckap4Q8BMK4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ckap4Q8BMK4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ckap4Q8BMK4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ckap4Q8BMK4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ckap4Q8BMK4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ckap4Q8BMK4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.63■□□□□ 0.25
Ckap4Q8BMK4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ckap4Q8BMK4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ckap4Q8BMK4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ckap4Q8BMK4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 Gm22325-201ENSMUST00000158904 308 ntBASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.61■□□□□ 0.25
Ckap4Q8BMK4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms