Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.01■□□□□ 0.47
Chmp2bQ8BJF9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2bQ8BJF9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2bQ8BJF9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2bQ8BJF9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.01■□□□□ 0.47
Chmp2bQ8BJF9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2bQ8BJF9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.01■□□□□ 0.47
Chmp2bQ8BJF9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2bQ8BJF9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2bQ8BJF9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2bQ8BJF9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Chmp2bQ8BJF9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chmp2bQ8BJF9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp2bQ8BJF9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp2bQ8BJF9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp2bQ8BJF9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18■□□□□ 0.47
Chmp2bQ8BJF9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp2bQ8BJF9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chmp2bQ8BJF9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp2bQ8BJF9 Gm37519-201ENSMUST00000191687 2210 ntBASIC18■□□□□ 0.47
Chmp2bQ8BJF9 Gm43338-201ENSMUST00000198617 2223 ntBASIC18■□□□□ 0.47
Chmp2bQ8BJF9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp2bQ8BJF9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18■□□□□ 0.47
Chmp2bQ8BJF9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp2bQ8BJF9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18■□□□□ 0.47
Chmp2bQ8BJF9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Chmp2bQ8BJF9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chmp2bQ8BJF9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2bQ8BJF9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2bQ8BJF9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2bQ8BJF9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2bQ8BJF9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Chmp2bQ8BJF9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2bQ8BJF9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.99■□□□□ 0.47
Chmp2bQ8BJF9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2bQ8BJF9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.99■□□□□ 0.47
Chmp2bQ8BJF9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2bQ8BJF9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.99■□□□□ 0.47
Chmp2bQ8BJF9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.99■□□□□ 0.47
Chmp2bQ8BJF9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2bQ8BJF9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2bQ8BJF9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2bQ8BJF9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.99■□□□□ 0.47
Chmp2bQ8BJF9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2bQ8BJF9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.99■□□□□ 0.47
Chmp2bQ8BJF9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chmp2bQ8BJF9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Gm6365-201ENSMUST00000054711 744 ntBASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp2bQ8BJF9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2bQ8BJF9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Chmp2bQ8BJF9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2bQ8BJF9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Chmp2bQ8BJF9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.97■□□□□ 0.47
Chmp2bQ8BJF9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2bQ8BJF9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.97■□□□□ 0.47
Chmp2bQ8BJF9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Chmp2bQ8BJF9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2bQ8BJF9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2bQ8BJF9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2bQ8BJF9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2bQ8BJF9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp2bQ8BJF9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Gm7291-201ENSMUST00000199147 382 ntBASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp2bQ8BJF9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms