Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.06■□□□□ 0.32
Smndc1Q8BGT7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smndc1Q8BGT7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smndc1Q8BGT7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smndc1Q8BGT7 Reep4-203ENSMUST00000226563 1444 ntBASIC17.06■□□□□ 0.32
Smndc1Q8BGT7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smndc1Q8BGT7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smndc1Q8BGT7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smndc1Q8BGT7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smndc1Q8BGT7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smndc1Q8BGT7 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.06■□□□□ 0.32
Smndc1Q8BGT7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smndc1Q8BGT7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smndc1Q8BGT7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.06■□□□□ 0.32
Smndc1Q8BGT7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smndc1Q8BGT7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smndc1Q8BGT7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smndc1Q8BGT7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smndc1Q8BGT7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smndc1Q8BGT7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smndc1Q8BGT7 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smndc1Q8BGT7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smndc1Q8BGT7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smndc1Q8BGT7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smndc1Q8BGT7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.05■□□□□ 0.32
Smndc1Q8BGT7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smndc1Q8BGT7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.05■□□□□ 0.32
Smndc1Q8BGT7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smndc1Q8BGT7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smndc1Q8BGT7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smndc1Q8BGT7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smndc1Q8BGT7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smndc1Q8BGT7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smndc1Q8BGT7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Smndc1Q8BGT7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smndc1Q8BGT7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smndc1Q8BGT7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smndc1Q8BGT7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Gm10849-201ENSMUST00000100397 618 ntBASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.04■□□□□ 0.32
Smndc1Q8BGT7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Gm13234-201ENSMUST00000120010 747 ntBASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smndc1Q8BGT7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smndc1Q8BGT7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smndc1Q8BGT7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smndc1Q8BGT7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms