Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim50Q810I2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim50Q810I2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim50Q810I2 Mir6349-201ENSMUST00000184059 97 ntBASIC17.15■□□□□ 0.34
Trim50Q810I2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim50Q810I2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim50Q810I2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim50Q810I2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim50Q810I2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim50Q810I2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim50Q810I2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim50Q810I2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trim50Q810I2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim50Q810I2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim50Q810I2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim50Q810I2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trim50Q810I2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim50Q810I2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim50Q810I2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim50Q810I2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim50Q810I2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim50Q810I2 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.14■□□□□ 0.33
Trim50Q810I2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim50Q810I2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trim50Q810I2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim50Q810I2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim50Q810I2 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.14■□□□□ 0.33
Trim50Q810I2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim50Q810I2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim50Q810I2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim50Q810I2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim50Q810I2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim50Q810I2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim50Q810I2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim50Q810I2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim50Q810I2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim50Q810I2 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.14■□□□□ 0.33
Trim50Q810I2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim50Q810I2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim50Q810I2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim50Q810I2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim50Q810I2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim50Q810I2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trim50Q810I2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim50Q810I2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim50Q810I2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim50Q810I2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim50Q810I2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim50Q810I2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim50Q810I2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trim50Q810I2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim50Q810I2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim50Q810I2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trim50Q810I2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim50Q810I2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim50Q810I2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trim50Q810I2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Trim50Q810I2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim50Q810I2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim50Q810I2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim50Q810I2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim50Q810I2 Gm18666-201ENSMUST00000190039 958 ntBASIC17.12■□□□□ 0.33
Trim50Q810I2 Gm29791-202ENSMUST00000207888 369 ntBASIC17.12■□□□□ 0.33
Trim50Q810I2 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.12■□□□□ 0.33
Trim50Q810I2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim50Q810I2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim50Q810I2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim50Q810I2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim50Q810I2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim50Q810I2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim50Q810I2 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.12■□□□□ 0.33
Trim50Q810I2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trim50Q810I2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim50Q810I2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim50Q810I2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Trim50Q810I2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim50Q810I2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.11■□□□□ 0.33
Trim50Q810I2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim50Q810I2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim50Q810I2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim50Q810I2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim50Q810I2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim50Q810I2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim50Q810I2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim50Q810I2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim50Q810I2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim50Q810I2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim50Q810I2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim50Q810I2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim50Q810I2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim50Q810I2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim50Q810I2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.1■□□□□ 0.33
Trim50Q810I2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim50Q810I2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim50Q810I2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Trim50Q810I2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.1■□□□□ 0.33
Trim50Q810I2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.1■□□□□ 0.33
Trim50Q810I2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.1■□□□□ 0.33
Trim50Q810I2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.1■□□□□ 0.33
Trim50Q810I2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms