Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Trnp1Q80ZI1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trnp1Q80ZI1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trnp1Q80ZI1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trnp1Q80ZI1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Trnp1Q80ZI1 Gm25925-201ENSMUST00000158314 306 ntBASIC19.88■□□□□ 0.77
Trnp1Q80ZI1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Trnp1Q80ZI1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.88■□□□□ 0.77
Trnp1Q80ZI1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trnp1Q80ZI1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Trnp1Q80ZI1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trnp1Q80ZI1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trnp1Q80ZI1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.88■□□□□ 0.77
Trnp1Q80ZI1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trnp1Q80ZI1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trnp1Q80ZI1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Trnp1Q80ZI1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.87■□□□□ 0.77
Trnp1Q80ZI1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trnp1Q80ZI1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trnp1Q80ZI1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
Trnp1Q80ZI1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trnp1Q80ZI1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Trnp1Q80ZI1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.87■□□□□ 0.77
Trnp1Q80ZI1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trnp1Q80ZI1 Gm27459-201ENSMUST00000184860 107 ntBASIC19.87■□□□□ 0.77
Trnp1Q80ZI1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trnp1Q80ZI1 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.87■□□□□ 0.77
Trnp1Q80ZI1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trnp1Q80ZI1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trnp1Q80ZI1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trnp1Q80ZI1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Trnp1Q80ZI1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trnp1Q80ZI1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trnp1Q80ZI1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trnp1Q80ZI1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trnp1Q80ZI1 BC021767-201ENSMUST00000126387 1716 ntBASIC19.86■□□□□ 0.77
Trnp1Q80ZI1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.86■□□□□ 0.77
Trnp1Q80ZI1 Gm5864-201ENSMUST00000202263 970 ntBASIC19.86■□□□□ 0.77
Trnp1Q80ZI1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.86■□□□□ 0.77
Trnp1Q80ZI1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trnp1Q80ZI1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trnp1Q80ZI1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trnp1Q80ZI1 Gm15794-201ENSMUST00000120182 631 ntBASIC19.85■□□□□ 0.77
Trnp1Q80ZI1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Trnp1Q80ZI1 Mir8098-201ENSMUST00000184011 137 ntBASIC19.85■□□□□ 0.77
Trnp1Q80ZI1 AW822252-206ENSMUST00000208904 237 ntBASIC19.85■□□□□ 0.77
Trnp1Q80ZI1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trnp1Q80ZI1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trnp1Q80ZI1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trnp1Q80ZI1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trnp1Q80ZI1 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.85■□□□□ 0.77
Trnp1Q80ZI1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trnp1Q80ZI1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trnp1Q80ZI1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trnp1Q80ZI1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trnp1Q80ZI1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trnp1Q80ZI1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trnp1Q80ZI1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trnp1Q80ZI1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trnp1Q80ZI1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trnp1Q80ZI1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.84■□□□□ 0.77
Trnp1Q80ZI1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trnp1Q80ZI1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trnp1Q80ZI1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trnp1Q80ZI1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trnp1Q80ZI1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.84■□□□□ 0.77
Trnp1Q80ZI1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Trnp1Q80ZI1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trnp1Q80ZI1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Trnp1Q80ZI1 Gm13884-201ENSMUST00000118103 829 ntBASIC19.83■□□□□ 0.77
Trnp1Q80ZI1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Trnp1Q80ZI1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.83■□□□□ 0.77
Trnp1Q80ZI1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trnp1Q80ZI1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Trnp1Q80ZI1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trnp1Q80ZI1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trnp1Q80ZI1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trnp1Q80ZI1 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.82■□□□□ 0.76
Trnp1Q80ZI1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.82■□□□□ 0.76
Trnp1Q80ZI1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.82■□□□□ 0.76
Trnp1Q80ZI1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trnp1Q80ZI1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trnp1Q80ZI1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trnp1Q80ZI1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trnp1Q80ZI1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trnp1Q80ZI1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trnp1Q80ZI1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trnp1Q80ZI1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Trnp1Q80ZI1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trnp1Q80ZI1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trnp1Q80ZI1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trnp1Q80ZI1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trnp1Q80ZI1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.81■□□□□ 0.76
Trnp1Q80ZI1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trnp1Q80ZI1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trnp1Q80ZI1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Trnp1Q80ZI1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trnp1Q80ZI1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trnp1Q80ZI1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms