Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp38Q80UU2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp38Q80UU2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp38Q80UU2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp38Q80UU2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp38Q80UU2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp38Q80UU2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp38Q80UU2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.56■□□□□ 0.4
Rpp38Q80UU2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp38Q80UU2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp38Q80UU2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp38Q80UU2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Rpp38Q80UU2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp38Q80UU2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp38Q80UU2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.56■□□□□ 0.4
Rpp38Q80UU2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp38Q80UU2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Rpp38Q80UU2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.56■□□□□ 0.4
Rpp38Q80UU2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp38Q80UU2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.56■□□□□ 0.4
Rpp38Q80UU2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp38Q80UU2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpp38Q80UU2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpp38Q80UU2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rpp38Q80UU2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpp38Q80UU2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
Rpp38Q80UU2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpp38Q80UU2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Rpp38Q80UU2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.55■□□□□ 0.4
Rpp38Q80UU2 Gm10517-202ENSMUST00000192970 758 ntBASIC17.55■□□□□ 0.4
Rpp38Q80UU2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.55■□□□□ 0.4
Rpp38Q80UU2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpp38Q80UU2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rpp38Q80UU2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp38Q80UU2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.54■□□□□ 0.4
Rpp38Q80UU2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.54■□□□□ 0.4
Rpp38Q80UU2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Rpp38Q80UU2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp38Q80UU2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp38Q80UU2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.54■□□□□ 0.4
Rpp38Q80UU2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp38Q80UU2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp38Q80UU2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp38Q80UU2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.54■□□□□ 0.4
Rpp38Q80UU2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Rpp38Q80UU2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp38Q80UU2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp38Q80UU2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rpp38Q80UU2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rpp38Q80UU2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rpp38Q80UU2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp38Q80UU2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Gm27011-201ENSMUST00000182352 972 ntBASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp38Q80UU2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rpp38Q80UU2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp38Q80UU2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp38Q80UU2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.52■□□□□ 0.4
Rpp38Q80UU2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp38Q80UU2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.52■□□□□ 0.4
Rpp38Q80UU2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp38Q80UU2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.52■□□□□ 0.4
Rpp38Q80UU2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp38Q80UU2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp38Q80UU2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.52■□□□□ 0.4
Rpp38Q80UU2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rpp38Q80UU2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rpp38Q80UU2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rpp38Q80UU2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Rpp38Q80UU2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp38Q80UU2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.51■□□□□ 0.39
Rpp38Q80UU2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp38Q80UU2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.51■□□□□ 0.39
Rpp38Q80UU2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp38Q80UU2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp38Q80UU2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp38Q80UU2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp38Q80UU2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rpp38Q80UU2 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.51■□□□□ 0.39
Rpp38Q80UU2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp38Q80UU2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rpp38Q80UU2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms