Protein–RNA interactions for Protein: Q80UJ7

Rab3gap1, Rab3 GTPase-activating protein catalytic subunit, mousemouse

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3gap1Q80UJ7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rab3gap1Q80UJ7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rab3gap1Q80UJ7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rab3gap1Q80UJ7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rab3gap1Q80UJ7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rab3gap1Q80UJ7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rab3gap1Q80UJ7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rab3gap1Q80UJ7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rab3gap1Q80UJ7 Gm43353-201ENSMUST00000199224 1295 ntBASIC21.39■■□□□ 1.01
Rab3gap1Q80UJ7 AC159205.6-201ENSMUST00000224935 887 ntBASIC21.39■■□□□ 1.01
Rab3gap1Q80UJ7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rab3gap1Q80UJ7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rab3gap1Q80UJ7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rab3gap1Q80UJ7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rab3gap1Q80UJ7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rab3gap1Q80UJ7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab3gap1Q80UJ7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.38■■□□□ 1.01
Rab3gap1Q80UJ7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab3gap1Q80UJ7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab3gap1Q80UJ7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rab3gap1Q80UJ7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab3gap1Q80UJ7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab3gap1Q80UJ7 Gm10418-201ENSMUST00000100943 576 ntBASIC21.38■■□□□ 1.01
Rab3gap1Q80UJ7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab3gap1Q80UJ7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Rab3gap1Q80UJ7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab3gap1Q80UJ7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab3gap1Q80UJ7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab3gap1Q80UJ7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab3gap1Q80UJ7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.38■■□□□ 1.01
Rab3gap1Q80UJ7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rab3gap1Q80UJ7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Rab3gap1Q80UJ7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Rab3gap1Q80UJ7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rab3gap1Q80UJ7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rab3gap1Q80UJ7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rab3gap1Q80UJ7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rab3gap1Q80UJ7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rab3gap1Q80UJ7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rab3gap1Q80UJ7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.37■■□□□ 1.01
Rab3gap1Q80UJ7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Rab3gap1Q80UJ7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rab3gap1Q80UJ7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Rab3gap1Q80UJ7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
Rab3gap1Q80UJ7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rab3gap1Q80UJ7 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.37■■□□□ 1.01
Rab3gap1Q80UJ7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rab3gap1Q80UJ7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rab3gap1Q80UJ7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rab3gap1Q80UJ7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rab3gap1Q80UJ7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rab3gap1Q80UJ7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rab3gap1Q80UJ7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rab3gap1Q80UJ7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rab3gap1Q80UJ7 Gm27463-201ENSMUST00000183569 57 ntBASIC21.36■■□□□ 1.01
Rab3gap1Q80UJ7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rab3gap1Q80UJ7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Rab3gap1Q80UJ7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Rab3gap1Q80UJ7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Rab3gap1Q80UJ7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rab3gap1Q80UJ7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rab3gap1Q80UJ7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC21.36■■□□□ 1.01
Rab3gap1Q80UJ7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rab3gap1Q80UJ7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab3gap1Q80UJ7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab3gap1Q80UJ7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab3gap1Q80UJ7 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.35■■□□□ 1.01
Rab3gap1Q80UJ7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab3gap1Q80UJ7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.35■■□□□ 1.01
Rab3gap1Q80UJ7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rab3gap1Q80UJ7 Gm24841-201ENSMUST00000158676 357 ntBASIC21.35■■□□□ 1.01
Rab3gap1Q80UJ7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.35■■□□□ 1.01
Rab3gap1Q80UJ7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab3gap1Q80UJ7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.35■■□□□ 1.01
Rab3gap1Q80UJ7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab3gap1Q80UJ7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Rab3gap1Q80UJ7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rab3gap1Q80UJ7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rab3gap1Q80UJ7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rab3gap1Q80UJ7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rab3gap1Q80UJ7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rab3gap1Q80UJ7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rab3gap1Q80UJ7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Rab3gap1Q80UJ7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rab3gap1Q80UJ7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rab3gap1Q80UJ7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rab3gap1Q80UJ7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rab3gap1Q80UJ7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rab3gap1Q80UJ7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rab3gap1Q80UJ7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rab3gap1Q80UJ7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rab3gap1Q80UJ7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rab3gap1Q80UJ7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.33■■□□□ 1.01
Rab3gap1Q80UJ7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rab3gap1Q80UJ7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC21.33■■□□□ 1.01
Rab3gap1Q80UJ7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Rab3gap1Q80UJ7 Gm4217-201ENSMUST00000182243 1002 ntBASIC21.33■■□□□ 1.01
Rab3gap1Q80UJ7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.33■■□□□ 1.01
Rab3gap1Q80UJ7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Rab3gap1Q80UJ7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms